DRSC/TRiP Functional Genomics Resources

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Protein Alignment numb and Ldlrap1

DIOPT Version :10

Sequence 1:NP_523523.2 Gene:numb / 34263 FlyBaseID:FBgn0002973 Length:556 Species:Drosophila melanogaster
Sequence 2:NP_663529.2 Gene:Ldlrap1 / 100017 MGIID:2140175 Length:308 Species:Mus musculus


Alignment Length:239 Identity:61/239 - (25%)
Similarity:100/239 - (41%) Gaps:36/239 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 MDRLRRSFRDSFRRRKDRVPESSK-----------PHQWQADEEAVRSATCSFSVKYLGCVEVFE 95
            ||.|:     |..|...|.|..:|           |..|....|.:..... ||:||||...|..
Mouse     1 MDALK-----SAGRALIRSPSLAKQSWAGGRHRKLPENWTDTRETLLEGMV-FSLKYLGMTLVER 59

  Fly    96 SRGMQVCEEALK----VLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEKVSFCAPDRNH 156
            .:|.::...|:|    ..:.|.::..:..|.||..|:.:.|..|..||.:.:|.::|:|..|:.|
Mouse    60 PKGEELSAAAVKRIVATAKASGKKLQKVTLKVSPRGIILTDSLTSQLIENVSIYRISYCTADKMH 124

  Fly   157 ERGFSYICRDGTTRRWMCHGFLACKDS-GERLSHAVGCAFAVCL-------ERKQRRDK--ECGV 211
            ::.|:||.:........||.||..|.. .:.::..|..||.|..       |.|::|:|  :.|.
Mouse   125 DKVFAYIAQSQQNESLECHAFLCTKRKVAQAVTLTVAQAFKVAFEFWQVSKEEKEKREKANQEGG 189

  Fly   212 TMTFDTKNS-----TFTRTGSFRQQTLTERLAMATVGTNERSVD 250
            .:....::|     |...||:........:..::||..|..:||
Mouse   190 DVPGTRRDSTPSLKTLVATGNLLDLEEVAKAPLSTVSANTNNVD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
numbNP_523523.2 PTB_Numb 67..201 CDD:241298 38/145 (26%)
NumbF 269..374 CDD:461874
Ldlrap1NP_663529.2 PTB_LDLRAP-mammal-like 43..165 CDD:269981 34/122 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..201 4/21 (19%)
Clathrin box. /evidence=ECO:0000250|UniProtKB:Q5SW96 211..215 0/3 (0%)
AP-2 complex binding. /evidence=ECO:0000250|UniProtKB:Q5SW96 248..275
[DE]-X(1,2)-F-X-X-[FL]-X-X-X-R motif. /evidence=ECO:0000250|UniProtKB:Q5SW96 256..265
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 288..308
Blue background indicates that the domain is not in the aligned region.

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