DRSC/TRiP Functional Genomics Resources

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Protein Alignment Toll-4 and Tlr1

DIOPT Version :10

Sequence 1:NP_523519.2 Gene:Toll-4 / 34235 FlyBaseID:FBgn0032095 Length:1125 Species:Drosophila melanogaster
Sequence 2:XP_038947853.1 Gene:Tlr1 / 305354 RGDID:1309975 Length:808 Species:Rattus norvegicus


Alignment Length:886 Identity:188/886 - (21%)
Similarity:327/886 - (36%) Gaps:253/886 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 HCKFTLGINEVACPLKCNCSYNRDKSQLEIDCWQKNLTTIP-SLPVPKKGSSALVFQSNLLAELP 423
            :|...||:..:...|.       ::|:|.|.....|||.:| .||:.   ::.|....|.::||.
  Rat    23 YCIVVLGLILIKIQLS-------EESELIIKRPNANLTRVPKDLPLQ---TTTLDVSQNNISELQ 77

  Fly   424 DNSLEGYHNLKSLDVSYNQLTSLSVS--QLPESLHYLDIRHNKITTLSPQVVEYL----YSVNVF 482
            .:.:.....|:...:|||:|..|::|  :....|.|||:.||::..:|......|    .|.|.|
  Rat    78 TSDILLLSKLRVFIMSYNRLQYLNISVFKFNTELEYLDLSHNELRLISCHATADLKHLDLSFNAF 142

  Fly   483 NQYGNKWSIYCDEY-HLQEFFWYKAKLLRIKTSKFQTIMEYIELSSKGSFVENFFVQNIDQLYLE 546
            :...     .|.|: :|.:..:......:|:.|..| ::.::.:|.....:.:.:.:..|...|:
  Rat   143 DALP-----ICKEFGNLSQLQFLGLSGSQIQNSSVQ-LIAHLNISKVLLVLGDTYGEKEDPKCLQ 201

  Fly   547 ANEDEIIDAFGPSDKYFNLKLMEALNHAIWLFSGEFDEI--ILHHLNSPCPYRCSCCFEWHTGEF 609
            ....|.:....||.:.|:..|..:::.||.|   |...|  :|...|        |.:...|.|.
  Rat   202 HISTETLHIVFPSKREFHFLLDMSVSTAISL---ELSNIKCVLEDKN--------CSYFLGTLER 255

  Fly   610 LINCR---NLSLDIYPRLPNSIPYKTTLYLDRNEIRKLTNTESLVVAGHASIHKLHMSQNLLREL 671
            |...:   ||:|:......||  :...|.|..:...|..:..::.:.||.:..:.|.|...||.|
  Rat   256 LRKTQRLSNLTLNNVDTTWNS--FINILQLVWHTPVKSFSISNVKLKGHFNFRRFHYSDTSLRAL 318

  Fly   672 PLH------------------------------------LLPENIT---YLDVRNNLLKYLDDGV 697
            .:|                                    |.|:.|:   |||..:|||.     .
  Rat   319 SIHQVVTDVFSFPQSNIYSIFSNMNIQSFTVSGTRMVHMLCPDQISPFLYLDFTDNLLT-----D 378

  Fly   698 IAFLEYRENITKIELSGNPWECNCKAKAFLSFLRRHEPMEYET-VLRRVEITDDKCPEDCICCVD 761
            |.|.:.|..|....||                |::::....|. :|..:|:|.       :..:|
  Rat   379 IVFEDCRNLIRLKTLS----------------LQKNQLKTLENIILMSMEMTS-------LQKLD 420

  Fly   762 TSNSDSLAYVVDCSGKELSEIPQLPTPTYGQTTLVFERNSLKKWPSSLLPGYSSVTRFYLAHNRL 826
            .| .:||.|                          .:..|...|..|||.       ..|:.|.|
  Rat   421 IS-QNSLRY--------------------------SDAGSPCSWTQSLLV-------LNLSSNML 451

  Fly   827 SD--IDQLPDKLEYLDISNNN--------------------------------FSALDDRV---- 853
            :|  ...||.|::.||:.||.                                ||:|...|    
  Rat   452 TDSVFRCLPPKVKVLDLHNNRIVSISKDVTHLQALQELNVASNFLTDLPGCGAFSSLSVLVIDHN 516

  Fly   854 ------RGFLQKRMNSSQLQLSLFGNPWTCRCEDKDFLVFVKEQAKNIANASAIQCIDTGRSLIE 912
                  ..|.|...|...:...  .||:.|.||.::|:       |||..||        |.::|
  Rat   517 SVSHPSSDFFQSCQNIRSITAG--NNPFRCTCELREFV-------KNIGQAS--------REVVE 564

  Fly   913 -------------VEETDI---------CPSVLIYYTSLAVSLLIIALSINVFICFRQP---IMI 952
                         ::.|.:         |.::|:..|..|..||:.|:..::.:.|..|   .|:
  Rat   565 GWPDSYRCDYPDSIKGTPLQDFHMSPLSCDTILLTVTIGATLLLLAAIGASLCLYFDLPWYLRML 629

  Fly   953 WFY---EHEICLSLAAR----RELDEDKKYDAFLSFTHKDEDLIE-EFVDRLENGRHKFRLCFYL 1009
            |.:   .|.      ||    .||..:.::.||:|::..|...:: |.:..||  :...|:|.:.
  Rat   630 WQWTQTRHR------ARNIPLEELQRNLQFHAFVSYSGHDSAWVKNELLPNLE--KDDIRVCLHE 686

  Fly  1010 RDWLVGESIPDCINQSVKGSRRIIILMTKNFLKSTWGRLEFRLALHATSRDRCKRLIVVLYPDVE 1074
            |:::.|:||.:.|...::.|.:.|.:::.:|::|.|...|...|.|....:....||::|...:.
  Rat   687 RNFVPGKSIVENIIHFIEKSYKSIFVLSPHFIQSEWCHYELYFAHHNLFHEGSDNLILILLEPIP 751

  Fly  1075 HFDDLDS--ELRAYMVLNTYLD-----RNNPNFWNKLMYSM 1108
            .:....:  :|:..|...|||:     ..:..||..|..|:
  Rat   752 QYSIPTNYHKLKTLMARRTYLEWPTEKSKHGLFWANLRASI 792

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Toll-4NP_523519.2 LRR 210..>470 CDD:443914 30/112 (27%)
leucine-rich repeat 264..287 CDD:275380
leucine-rich repeat 288..308 CDD:275380
leucine-rich repeat 309..334 CDD:275380
leucine-rich repeat 335..386 CDD:275380 4/25 (16%)
PRK15370 <381..>482 CDD:185268 30/107 (28%)
leucine-rich repeat 388..408 CDD:275380 7/20 (35%)
leucine-rich repeat 412..432 CDD:275378 4/19 (21%)
LRR <416..591 CDD:443914 41/183 (22%)
leucine-rich repeat 433..454 CDD:275378 7/22 (32%)
leucine-rich repeat 455..478 CDD:275378 8/26 (31%)
leucine-rich repeat 479..490 CDD:275378 2/10 (20%)
leucine-rich repeat 632..657 CDD:275378 5/24 (21%)
leucine-rich repeat 658..679 CDD:275378 8/56 (14%)
leucine-rich repeat 680..706 CDD:275378 10/28 (36%)
PCC 684..>771 CDD:188093 19/87 (22%)
leucine-rich repeat 707..719 CDD:275378 3/11 (27%)
leucine-rich repeat 771..791 CDD:275380 0/19 (0%)
PRK15370 <793..>877 CDD:185268 25/127 (20%)
leucine-rich repeat 793..815 CDD:275378 5/21 (24%)
leucine-rich repeat 816..835 CDD:275378 6/20 (30%)
leucine-rich repeat 836..859 CDD:275378 9/64 (14%)
TIR 974..1110 CDD:214587 34/143 (24%)
Tlr1XP_038947853.1 leucine-rich repeat 63..86 CDD:275378 4/22 (18%)
LRR <64..>169 CDD:443914 26/109 (24%)
leucine-rich repeat 87..110 CDD:275378 7/22 (32%)
leucine-rich repeat 111..125 CDD:275378 6/13 (46%)
leucine-rich repeat 132..156 CDD:275378 7/28 (25%)
leucine-rich repeat 157..169 CDD:275378 1/11 (9%)
LRR <368..>542 CDD:443914 46/237 (19%)
leucine-rich repeat 368..389 CDD:275380 9/25 (36%)
leucine-rich repeat 390..415 CDD:275380 6/40 (15%)
leucine-rich repeat 416..440 CDD:275380 7/50 (14%)
leucine-rich repeat 441..462 CDD:275380 8/27 (30%)
leucine-rich repeat 463..485 CDD:275380 4/21 (19%)
leucine-rich repeat 486..507 CDD:275380 1/20 (5%)
leucine-rich repeat 508..531 CDD:275380 4/22 (18%)
LRRCT 540..594 CDD:214507 14/68 (21%)
TIR 652..795 CDD:214587 34/143 (24%)
Blue background indicates that the domain is not in the aligned region.

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