DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and DIP-epsilon

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001137799.1 Gene:DIP-epsilon / 7354433 FlyBaseID:FBgn0259714 Length:467 Species:Drosophila melanogaster


Alignment Length:470 Identity:278/470 - (59%)
Similarity:328/470 - (69%) Gaps:39/470 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 GGGGPVAGSGTGSTVVGSNGVIVAGGGANVPTSNL-NIVVEEPEFTEYIENVTVPAGRNVKLGCS 135
            |.|..:|.|...||..||.     |...||..|.| |::.|:||||:.|||:||||||||||.||
  Fly    15 GLGCLIASSVALSTDTGSE-----GNAGNVGGSTLNNVISEDPEFTDVIENITVPAGRNVKLACS 74

  Fly   136 VKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYMCQI 200
            |||||||||||||||||||||||||||||||||||||||||:||||:||||||.|||||||||||
  Fly    75 VKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDKHRTWFLHINNVQEEDRGRYMCQI 139

  Fly   201 NTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDDNSRIAINK 265
            ||||||||:|::.|||||||||:|:|||:|||||.|::|||:|.|||.|.|||||||.::|.|||
  Fly   140 NTVTAKTQYGFVKVVVPPNIDDALTSSDIIVREGDNVTLRCKAKGSPEPTIKWKRDDGNKIVINK 204

  Fly   266 NHIVNEWEGDTLEITRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFN 330
            ...|::.|.|:||:.|||||.||||||||||||||:|||||||||||.||:.|||||||.|.|||
  Fly   205 TLEVHDLETDSLELERISRLHMGAYLCIASNGVPPSVSKRIKVSVDFSPMVWIPHQLVGIPIGFN 269

  Fly   331 VTIECFTEAHPTSLNYWTRGEGPIIHDSHKYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVA 395
            :|:|||.||:|||||||||....:|.:|.|||.|...|.|:||..|:|||.||.|.|.|.|||||
  Fly   270 ITLECFIEANPTSLNYWTRENDQMITESSKYKTETIPGHPSYKATMRLTITNVQSSDYGNYKCVA 334

  Fly   396 KNPRGETDGIIRLYVSYPPTT----ASSGIYSTDTHWGE-----------NGINNNYAYGGPDST 445
            |||||:.||.|:||:|.||||    .::.:..|.|...|           ||  |.....|...|
  Fly   335 KNPRGDMDGNIKLYMSSPPTTQPPPTTTTLRRTTTTAAEIALDGYINTPLNG--NGIGIVGEGPT 397

  Fly   446 RSIYAQDKNT-RYQSNLNEIGLSEQKSFLDKTQNPLLANGNANEAD---AESNGARGHNPSMAIA 506
            .|:.|..|:: :|.||||||..|:||          |...:....|   .:|:|:.|:  .||.:
  Fly   398 NSVIASGKSSIKYLSNLNEIDKSKQK----------LTGSSPKGFDWSKGKSSGSHGN--LMASS 450

  Fly   507 WLFVVIATLLLTIRS 521
            |..:.....|||..|
  Fly   451 WPLICCILALLTTHS 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 86/95 (91%)
Ig 130..200 CDD:143165 65/69 (94%)
I-set 226..310 CDD:254352 59/83 (71%)
IGc2 233..298 CDD:197706 42/64 (66%)
Ig 313..410 CDD:299845 61/96 (64%)
IG_like 325..410 CDD:214653 52/84 (62%)
DIP-epsilonNP_001137799.1 IG_like 59..155 CDD:214653 86/95 (91%)
Ig 69..139 CDD:143165 65/69 (94%)
IG_like 165..249 CDD:214653 59/83 (71%)
IGc2 172..237 CDD:197706 42/64 (66%)
IG_like 267..348 CDD:214653 50/80 (63%)
Ig 270..339 CDD:299845 42/68 (62%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460426
Domainoid 1 1.000 56 1.000 Domainoid score I10955
eggNOG 1 0.900 - - E1_KOG3510
Homologene 1 1.000 - - H41139
Inparanoid 1 1.050 128 1.000 Inparanoid score I4644
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D102261at50557
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - otm26286
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
1110.900

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