DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and ntm

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001003852.2 Gene:ntm / 678534 ZFINID:ZDB-GENE-060421-6020 Length:375 Species:Danio rerio


Alignment Length:355 Identity:95/355 - (26%)
Similarity:167/355 - (47%) Gaps:40/355 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRIS-VTHDK 174
            |.....:.::|:|:..|..:.|.||..:..:: .||::  :|:||.......:.:||:| ||..:
Zfish    29 ESQSDNKQMDNITIRQGETLFLSCSQGDFVTH-TAWLN--RSSILYAGEDKWSVDPRVSLVTLSQ 90

  Fly   175 HDRHRTWYLHINNVHEEDRGRYMCQINTVT-AKTQFGYLNVVVPPNIDDSLSSSDVIVREGANIS 238
            .:    :.:.|.:|...|.|:|:|.:.|.: .:|...::.|.|||.|.:  .|.|::|.||:|::
Zfish    91 EE----FTIKIEDVDVTDEGQYICAVQTSSRPRTTSVHIIVQVPPKIVN--LSRDLVVNEGSNVT 149

  Fly   239 LRCRASGSPRPIIKWKRDDNSRIAINKNHIVNEWEGDTLEITRISRLDMGAYLCIASNGVPPTVS 303
            |.|.|:|.|.|.|.|:....|..:::.       :.:.|:|..|||...|.|.|.|:|.: ...:
Zfish   150 LMCLANGKPEPAIVWRMKSPSDDSLSS-------DSEVLDIPFISRYRAGVYECTAANDI-AVDT 206

  Fly   304 KRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPIIHDSHKYKVEATVG 368
            :.::::|::.|.:..... ||...|....::|..:|.|.:...|.|.:..|.:.....::||...
Zfish   207 QTVELTVNYAPSVSDGRD-VGVTLGQRGVLQCEADAVPEADFEWYRDDRRIFNGLDGIEIEAAGA 270

  Fly   369 LPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPPT--------TASSGIYSTD 425
            |      .:||..|||..|.|.|.|||.|..|..:....||....||        |:.|.:..|.
Zfish   271 L------SRLTFFNVSEADYGNYTCVAINKLGSANTSFVLYEIIEPTSSTLLQVETSPSVLEMTS 329

  Fly   426 THWGENGINNNYAYGGPDSTRSIYAQDKNT 455
            :...:..:.|: .:.||.:     .||.|:
Zfish   330 SDLEQTPLQND-LWEGPGA-----VQDGNS 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 25/97 (26%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 1/3 (33%)
Ig strand E 178..185 CDD:409405 0/6 (0%)
IgI_1_MuSK 218..310 CDD:409562 27/91 (30%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 2/4 (50%)
Ig strand B 237..244 CDD:409562 2/6 (33%)
Ig strand C 250..255 CDD:409562 2/4 (50%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 0/2 (0%)
Ig strand E 275..281 CDD:409562 2/5 (40%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 0/7 (0%)
IG_like 325..410 CDD:214653 24/84 (29%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 1/3 (33%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
ntmNP_001003852.2 Ig 39..127 CDD:472250 24/94 (26%)
Ig strand B 48..52 CDD:409353 1/3 (33%)
Ig strand C 60..64 CDD:409353 1/4 (25%)
Ig strand E 93..97 CDD:409353 0/3 (0%)
Ig strand F 107..112 CDD:409353 2/4 (50%)
Ig strand G 120..123 CDD:409353 1/2 (50%)
Ig_3 130..200 CDD:464046 27/78 (35%)
Ig 223..304 CDD:472250 25/87 (29%)
Ig strand B 233..237 CDD:409353 0/3 (0%)
Ig strand C 246..250 CDD:409353 0/3 (0%)
Ig strand E 272..276 CDD:409353 1/3 (33%)
Ig strand F 286..291 CDD:409353 2/4 (50%)

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