DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and opcml

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001005580.1 Gene:opcml / 449538 ZFINID:ZDB-GENE-040927-3 Length:342 Species:Danio rerio


Alignment Length:293 Identity:100/293 - (34%)
Similarity:148/293 - (50%) Gaps:27/293 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 ENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDRHRTWYLH 184
            :|:||..|.:..|.||:.|..| :|||::  ::.||...|...:.:||:.:.:...:.:.   :.
Zfish    40 DNITVRQGDSAVLKCSMDNKVS-RVAWLN--RTTILFTGNEKWSLDPRVVLLNTAVNEYS---IK 98

  Fly   185 INNVHEEDRGRYMCQI--NTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISLRCRASGSP 247
            |.||:..|.|.|:|.|  |.....|:. :|.|.||..|.:  .|:||.|.||:|:||.|.|.|.|
Zfish    99 ILNVNLYDEGPYVCSILTNKKPESTKV-HLIVQVPARIVN--VSTDVSVNEGSNVSLMCLAIGRP 160

  Fly   248 RPIIKWK-RDDNSRIAINKNHIVNEWEGDTLEITRISRLDMGAYLCIASNGVPPTVSKRIKVSVD 311
            .|.|.|| |....      |.||.  ||:.:|:|.|::...|:|.||.||.:.|...:.::|:|:
Zfish   161 EPSILWKFRSSKG------NRIVT--EGEYVEMTGITKDMSGSYDCITSNDISPPDVRTVQVTVN 217

  Fly   312 FPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPIIHDSHKYKVEATVGLPAYKTHM 376
            :||::..... .|...|....:.|...|.|.:...|.:||..|::..:..|:| ..|    |..|
Zfish   218 YPPVISRARS-TGTAVGQKGVLWCEASAVPLADFQWFKGERRILNGFNGVKIE-NKG----KQSM 276

  Fly   377 KLTIINVSSGDDGIYKCVAKNPRGETDGIIRLY 409
             ||..|||..|.|.|.|||.|..|.|:..|.||
Zfish   277 -LTFFNVSEEDYGNYTCVAINTLGITNASIILY 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 29/97 (30%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 2/3 (67%)
Ig strand E 178..185 CDD:409405 0/6 (0%)
IgI_1_MuSK 218..310 CDD:409562 35/92 (38%)
Ig strand A 218..221 CDD:409562 0/2 (0%)
Ig strand A' 226..231 CDD:409562 3/4 (75%)
Ig strand B 237..244 CDD:409562 3/6 (50%)
Ig strand C 250..255 CDD:409562 3/5 (60%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 1/2 (50%)
Ig strand E 275..281 CDD:409562 1/5 (20%)
Ig strand F 288..295 CDD:409562 4/6 (67%)
Ig strand G 302..310 CDD:409562 1/7 (14%)
IG_like 325..410 CDD:214653 30/85 (35%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 2/3 (67%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
opcmlNP_001005580.1 Ig 41..129 CDD:472250 28/94 (30%)
Ig strand B 50..54 CDD:409353 1/3 (33%)
Ig strand C 62..66 CDD:409353 2/3 (67%)
Ig strand E 95..99 CDD:409353 0/6 (0%)
Ig strand F 109..114 CDD:409353 2/4 (50%)
Ig strand G 122..125 CDD:409353 1/2 (50%)
Ig 128..214 CDD:472250 37/95 (39%)
Ig strand B 150..154 CDD:409353 2/3 (67%)
Ig strand C 163..167 CDD:409353 1/3 (33%)
Ig strand E 181..185 CDD:409353 0/3 (0%)
Ig strand F 195..200 CDD:409353 2/4 (50%)
Ig 220..308 CDD:472250 30/94 (32%)
Ig strand B 236..240 CDD:409353 0/3 (0%)
Ig strand C 249..253 CDD:409353 0/3 (0%)
Ig strand E 275..279 CDD:409353 2/4 (50%)
Ig strand F 289..294 CDD:409353 2/4 (50%)
Ig strand G 302..305 CDD:409353 0/2 (0%)

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