DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and negr1

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:335 Identity:102/335 - (30%)
Similarity:150/335 - (44%) Gaps:51/335 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 EFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDRH 178
            ::|...|:|....|....|.|.:.: |..|.||::  :|:|:...|...:.:||:|:..:..|:|
Zfish    39 DYTTSSESVVSRQGDTALLRCYLLD-GISKGAWLN--RSSIIYAGNDKWSGDPRVSIVSNVGDKH 100

  Fly   179 RTWYLHINNVHEEDRGRYMCQINTV-TAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISLRCR 242
            . :.|.|..|...|.|.|.|.|.:. ....:...|.|.|||.|.|  .|||:.|.||:|:||.|.
Zfish   101 E-YSLQIQKVDVTDEGVYTCSIQSERNLHPKLIQLIVKVPPKIYD--ISSDITVNEGSNVSLICA 162

  Fly   243 ASGSPRPIIKWKRDDNSRIAINKNHI---VNEWE-GDTLEITRISRLDMGAYLCIASNGVPPTVS 303
            |||.|.|.|.|:            ||   ..::| |:.|.||.|||...|.|.|.|.|.:....:
Zfish   163 ASGKPEPKISWR------------HISPSARKYESGEYLNITGISRDQAGDYECGAENDIASPDT 215

  Fly   304 KRIKVSVDFPPMLLIPHQLV--GAPEGFNVTIECFTEAHPTSLNYWTRGE-------GPIIHDSH 359
            |.::|:|:|||.:   |::.  |...|....:.|...|.|:.:..|.:||       |.:|::..
Zfish   216 KTVRVTVNFPPAI---HEMKSHGVRPGQVALLRCEAAAVPSPVFEWYKGEKRINMGQGIVINNLS 277

  Fly   360 KYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPPTTAS--SGIY 422
            ...|              ||:.|::....|.|.|||.|..|..:..:.|.....|||.|  |...
Zfish   278 SRSV--------------LTVKNMTQDRYGNYTCVAVNRLGTANASVPLNPIIEPTTTSAVSSPA 328

  Fly   423 STDTHWGENG 432
            |....:|..|
Zfish   329 SNPAMYGSTG 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 27/96 (28%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 2/3 (67%)
Ig strand E 178..185 CDD:409405 2/6 (33%)
IgI_1_MuSK 218..310 CDD:409562 37/95 (39%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 3/4 (75%)
Ig strand B 237..244 CDD:409562 3/6 (50%)
Ig strand C 250..255 CDD:409562 2/4 (50%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 2/5 (40%)
Ig strand E 275..281 CDD:409562 2/5 (40%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 2/7 (29%)
IG_like 325..410 CDD:214653 21/91 (23%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 1/3 (33%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
negr1XP_009300786.1 Ig 42..121 CDD:472250 24/82 (29%)
Ig strand B 55..59 CDD:409353 1/3 (33%)
Ig strand C 67..71 CDD:409353 2/3 (67%)
Ig strand E 102..106 CDD:409353 1/3 (33%)
Ig strand F 116..121 CDD:409353 2/4 (50%)
Ig 140..222 CDD:472250 37/95 (39%)
Ig strand B 157..161 CDD:409256 2/3 (67%)
Ig strand C 170..174 CDD:409256 1/3 (33%)
Ig strand E 187..191 CDD:409256 1/3 (33%)
Ig strand F 201..206 CDD:409256 2/4 (50%)
Ig strand G 215..218 CDD:409256 1/2 (50%)
Ig 236..312 CDD:472250 20/89 (22%)
Ig strand B 242..246 CDD:409353 0/3 (0%)
Ig strand C 255..259 CDD:409353 0/3 (0%)
Ig strand E 280..284 CDD:409353 2/17 (12%)
Ig strand F 294..299 CDD:409353 2/4 (50%)
Ig strand G 307..310 CDD:409353 0/2 (0%)

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