Protein Alignment: DIP-zeta and Dscam3

• Sequence 1: NP_723441.2
• Gene: DIP-zeta
• FlyBaseID: FBgn0051708
• Length: 532
• Species: Drosophila melanogaster
• Sequence 2: NP_996226.2
• Gene: Dscam3
• FlyBaseID: FBgn0261046
• Length: 2087
• Species: Drosophila melanogaster
• Alignment Length: 557
• Identity: 126/558 (23%)
• Similarity: 190/558 (34%)
• Gaps: 170/558 (30%)

  Fly     8 LIGALLV------LAATAGDSTNKIIL---PQILNGGGGGGGVG-TAQGKHP--------SGSKT 54
            |:||||:      |.||:|......:|   |::|.|...|..|. ||.|..|        .||
  Fly    16 LLGALLLAVLATPLLATSGLRVPTFLLEPAPRLLFGNDTGAQVTCTAHGSPPPLVTWVLRDGS-- 78

  Fly    55 VATGVVPNFGGAAGNGAGGGGP----------------VAGSGTGSTVVGSNGVIVAGGGANVPT 103
            :|| .||.....:|||.....|                ...|....||:..|..:.|     |..
  Fly    79 LAT-QVPGLRKISGNGTLHFPPFLAQYYRTDVHEATYRCRASNEAGTVLSRNVQVHA-----VVR 137

  Fly   104 SNLNIVVEEPE------------FTEYI------------ENVTVP-----AGRNVKLGCS---- 135
            ...::.||..|            ..||:            |.:.:|     |||.|.|..|
  Fly   138 RQFHVHVENTEVYLGNSALIKCAIPEYVRPYVRVASWHRGEEILLPDLSDVAGRYVVLAASGDLY 202

  Fly   136 VKNLGSYKVAWMHF------------EQSAILTVHNHVITRN--PR-----ISVTHDK--HDRHR 179
            |:::.| :...|.|            ::|..:.:....:::|  ||     :...|.:  :|.|.
  Fly   203 VRSVRS-EDGLMKFSCLVTNTLNGERQRSDAVMLQVKELSKNLAPRTTQKPVMEIHVERGNDVHL 266

  Fly   180 ------------TWY-----------------------LHINNVHEEDRGRYMCQINTVTAKTQF 209
                        |||                       |.|.|..|.|.|:::||     |..||
  Fly   267 PCNIQGNPFPIFTWYRVSDSAALYPIPSSQRVILSRTLLLIKNADERDAGKWICQ-----ASNQF 326

  Fly   210 G------------YLNVVVPPNIDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDD----- 257
            |            |::|.:.|.:.        ||..|...:..|..:||....|.|..:.
  Fly   327 GEQRIEIRLSVNSYVSVHILPQVQ--------IVNSGGTANFNCTTTGSAIDAIDWLHNGKPLQA 383

  Fly   258 NSRIAINKNHIVNEWEGDTLEITRISRLDMGAYLCIASN-GVPPTVSKRIKVSVDFPPMLLIPHQ 321
            |:.:...:::| ......:|.:..:.|.|.|.|.|:..| .........:|:. |..|.|:....
  Fly   384 NNALTTGRDNI-RFLSKSSLLVQNVGRRDRGVYQCLVENQRASAQAMAELKLG-DTVPELIYTFI 446

  Fly   322 LVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPIIHDS--HKYKVEATVGLPA-YKTHMKLTIINV 383
            ......|..::::|.....|.....|.....||:..|  |::.:...|.:.. ..:|  |.|.:|
  Fly   447 EQNVRPGPLISLKCSASGSPPPQFAWLLDSQPIMDVSLHHRFAIGQFVDMSGDVISH--LNISHV 509

  Fly   384 SSGDDGIYKCVAKNPRGETDGIIRLYVSYPPTTASSG 420
            ...|.|:|||||.|..|......||.|..||...:.|
  Fly   510 RPDDGGLYKCVASNSMGSVQHSARLNVYGPPYVRAIG 546

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DIP-zeta	NP_723441.2	IG_like	120..216	CDD:214653	36/173 (21%)
		Ig	130..200	CDD:143165	25/130 (19%)
		I-set	226..310	CDD:254352	18/90 (20%)
		IGc2	233..298	CDD:197706	15/71 (21%)
		Ig	313..410	CDD:299845	26/100 (26%)
		IG_like	325..410	CDD:214653	24/88 (27%)
Dscam3	NP_996226.2	IG	56..133	CDD:214652	19/80 (24%)
		Ig	56..125	CDD:143165	17/72 (24%)
		I-set	246..337	CDD:254352	20/96 (21%)
		Ig	264..334	CDD:143165	16/75 (21%)
		I-set	345..433	CDD:254352	18/97 (19%)
		Ig	358..431	CDD:143165	14/74 (19%)
		Ig	456..533	CDD:143165	21/79 (27%)
		IGc2	553..619	CDD:197706
		I-set	634..724	CDD:254352
		ig	645..712	CDD:278476
		IG_like	734..815	CDD:214653
		Ig	745..815	CDD:299845
		I-set	820..913	CDD:254352
		Ig	838..920	CDD:299845
		FN3	917..1033	CDD:238020
		FN3	1040..1142	CDD:238020
		fn3	1150..1237	CDD:278470
		FN3	1263..1345	CDD:238020
		Ig	1350..1436	CDD:299845
		IG_like	1358..1436	CDD:214653
		FN3	1441..1530	CDD:238020
		FN3	1542..1620	CDD:238020

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG3510
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.900