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Protein Alignment DIP-zeta and robo1

DIOPT Version :9

Sequence 1:	NP_723441.2	Gene:	DIP-zeta / 34231	FlyBaseID:	FBgn0051708	Length:	532	Species:	Drosophila melanogaster
Sequence 2:	NP_476899.1	Gene:	robo1 / 37603	FlyBaseID:	FBgn0005631	Length:	1395	Species:	Drosophila melanogaster

Alignment Length:	479	Identity:	117/479 - (24%)
Similarity:	183/479 - (38%)	Gaps:	107/479 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly   108 IVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTH 172
            ||..:|.|.:..::..:..|:.....|||......||.|...|.:..::          |..:.|
  Fly   250 IVQVKPYFMKEPKDQVMLYGQTATFHCSVGGDPPPKVLWKKEEGNIPVS----------RARILH 304

  Fly   173 DKHDRHRTWYLHINNVHEEDRGRYMCQ----INTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVRE 233
            |:..      |.|:|:...|.|.|:|:    :..::|:..   |.|..|||.....|:..|
  Fly   305 DEKS------LEISNITPTDEGTYVCEAHNNVGQISARAS---LIVHAPPNFTKRPSNKKV---- 356

  Fly   234 GAN--ISLRCRASGSPRPIIKWKRDDNSRIAI-NKNHIVNEWEGD-TLEITRISRLDMGAYLCIA 294
            |.|  :.|.|.|||:|.|.:.|.::..|.:.. |.:|.......| ||:||.:.:.|.|.|:|.|
  Fly   357 GLNGVVQLPCMASGNPPPSVFWTKEGVSTLMFPNSSHGRQHVAADGTLQITDVRQEDEGYYVCSA 421

  Fly   295 SNGV-PPTVSKRIKV-SVDF--PPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPII 355
            .:.| ..||...::| |:|.  ||::.|.......|:|...|:.|....:|:....|       .
  Fly   422 FSVVDSSTVRVFLQVSSLDERPPPIIQIGPANQTLPKGSVATLPCRATGNPSPRIKW-------F 479

  Fly   356 HDSHKYKVEATVGLPAYKTHMKLTIINVSS--------GDDGIYKCVAKNPRGETDGIIRLYVSY 412
            ||.|           |.:...:.:||..||        .|.|.|.|.|...||||.....|.|..
  Fly   480 HDGH-----------AVQAGNRYSIIQGSSLRVDDLQLSDSGTYTCTASGERGETSWAATLTVEK 533

  Fly   413 PPTT-----ASSGIY---------------STDTHWGENG---------INNNYAYGGPD-STRS 447
            |.:|     |....|               |....|.::.         |.....|..|| .|..
  Fly   534 PGSTSLHRAADPSTYPAPPGTPKVLNVSRTSISLRWAKSQEKPGAVGPIIGYTVEYFSPDLQTGW 598

  Fly   448 IYAQDKNTRYQSNLNEIGLSEQKSFL-----DKTQNPLLANGNAN-----EADAESNGARGHNPS 502
            |.|..:....|..::  ||:...|::     :.||...:.:|.:|     |||.::..|.    .
  Fly   599 IVAAQRVGDTQVTIS--GLTPGTSYVFLVRAENTQGISVPSGLSNTIKTIEADFDAASAN----D 657

  Fly   503 MAIAWLFVVIATLLLTIRSAVGSS 526
            ::.|...:...::.|...||:.:|
  Fly   658 LSAARTLLTGKSVELIDASAINAS 681

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.