Protein Alignment: DIP-zeta and Dscam1

• Sequence 1: NP_723441.2
• Gene: DIP-zeta
• FlyBaseID: FBgn0051708
• Length: 532
• Species: Drosophila melanogaster
• Sequence 2: NP_001246162.1
• Gene: Dscam1
• FlyBaseID: FBgn0033159
• Length: 2038
• Species: Drosophila melanogaster
• Alignment Length: 466
• Identity: 100/467 (21%)
• Similarity: 159/467 (34%)
• Gaps: 134/467 (29%)

  Fly   113 PEFTEYIENVTVPAGRNVKLGCSV-KNLGSYKVAWMHFEQSAILTVHNHV--ITRNPRISVTHDK 174
            |:...:.....:..|.::.|.|.: |.....||.| .||:||.....:.|  ..|..|||
  Fly   622 PQIVPFAYEDLINMGDSIDLFCQIQKGDRPIKVHW-SFERSAGDYGFDQVQPQMRTNRIS----- 680

  Fly   175 HDRHRTWYLHINNVHEEDRGRYMCQINTVTAKTQFGY-LNVVVPPNIDDSLSSSDVIVREGANIS 238
               .:|..:.|.:......||..|..:.....|.:.. |.|.|||..  .|..:|....:|::..
  Fly   681 ---EKTSMISIPSASPAHTGRDTCIASNKAGTTTYSVDLTVNVPPRW--ILEPTDKAFAQGSDAK 740

  Fly   239 LRCRASGSPRPIIKW--------------KRDDNSRIAINKNHIVNEWEGDTLEITRISRLDMGA 289
            :.|:|.|.|:|.:.|              |:.||.|:           |..||.:..|.:.:.|.
  Fly   741 VECKADGFPKPQVTWKKAVGDTPGEYKDLKKSDNIRV-----------EEGTLHVDNIQKTNEGY 794

  Fly   290 YLCIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTE---------AHPTSLN 345
            |||.|.||:...:|..|.:||..||.                    |||         ..|..|.
  Fly   795 YLCEAINGIGSGLSAVIMISVQAPPE--------------------FTEKLRNQTARRGEPAVLQ 839

  Fly   346 YWTRGEGPI------------IHDSHKYKVEATV---GLPAYKTHMKLTIINVSSGDDGIYKCVA 395
            ...:||.||            ..:.::|.:...:   |:.:     .|:|......|..::.|||
  Fly   840 CEAKGEKPIGILWNMNNMRLDPKNDNRYTIREEILSTGVMS-----SLSIKRTERSDSALFTCVA 899

  Fly   396 KNPRGETDGIIRLYVSYPP-------TTASSGIYSTDTHWGENGINNNYAYGGPDSTRSIYAQDK 453
            .|..|..|..|.:.|...|       ....|| .|....|.:       .|.|.........:.|
  Fly   900 TNAFGSDDASINMIVQEVPEMPYALKVLDKSG-RSVQLSWAQ-------PYDGNSPLDRYIIEFK 956

  Fly   454 NTRYQSNLNEIGLSEQKSFLDKTQNPLLANGNANEADAES-NGARGHNPSMAIAWLFVVIATLLL 517
            .:|  ::.:||             :.::..|:..||..:. :.|..:|              :.:
  Fly   957 RSR--ASWSEI-------------DRVIVPGHTTEAQVQKLSPATTYN--------------IRI 992

  Fly   518 TIRSAVGSSHS 528
            ...:|:|:|.|
  Fly   993 VAENAIGTSQS 1003

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DIP-zeta	NP_723441.2	IG_like	120..216	CDD:214653	24/100 (24%)
		Ig	130..200	CDD:143165	20/73 (27%)
		I-set	226..310	CDD:254352	26/98 (27%)
		IGc2	233..298	CDD:197706	22/79 (28%)
		Ig	313..410	CDD:299845	23/121 (19%)
		IG_like	325..410	CDD:214653	21/109 (19%)
Dscam1	NP_001246162.1	Ig	38..130	CDD:299845
		IG	57..133	CDD:214652
		IG_like	267..343	CDD:214653
		Ig	269..340	CDD:143165
		IG_like	353..425	CDD:214653
		IGc2	361..413	CDD:197706
		I-set	433..527	CDD:254352
		IGc2	446..517	CDD:197706
		I-set	533..618	CDD:254352
		IGc2	544..607	CDD:197706
		Ig	641..714	CDD:143165	21/82 (26%)
		IGc2	735..804	CDD:197706	22/80 (28%)
		I-set	819..914	CDD:254352	22/120 (18%)
		Ig	833..921	CDD:299845	20/93 (22%)
		FN3	918..1011	CDD:238020	20/124 (16%)
		FN3	1018..1116	CDD:238020
		FN3	1124..1217	CDD:238020
		FN3	1222..1312	CDD:238020
		Ig	1339..1406	CDD:299845
		FN3	1409..1499	CDD:238020
		FN3	1504..1584	CDD:238020
		Dscam_C	1890..2008	CDD:289151

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
eggNOG	1	0.900				E1_KOG3510
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
	1	0.900