DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and dpr4

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001014616.2 Gene:dpr4 / 3346160 FlyBaseID:FBgn0053512 Length:323 Species:Drosophila melanogaster


Alignment Length:250 Identity:70/250 - (28%)
Similarity:106/250 - (42%) Gaps:32/250 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 EEPEFTEYIEN-----VTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISV 170
            |.|....|.:|     ||...|:...|.|.|:|||...|:|:......||||.....|.:.|...
  Fly    39 ETPYSQPYFDNSSRREVTATVGQAALLHCRVRNLGDRAVSWIRKRDLHILTVGILTYTNDQRFQS 103

  Fly   171 THDKHDRHRTWYLHINNVHEEDRGRYMCQINTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVREGA 235
            .|.:....  |.|.|::....|.|.|.||::|....:|...|||||  :....|.::::.::.|:
  Fly   104 LHSEGSDE--WTLRISSPQPRDSGTYECQVSTEPKISQGFRLNVVV--SRAKILGNAELFIKSGS 164

  Fly   236 NISLRCRASGSPRP--IIKW---KRDDN--SRIAINKNHIVNEWEGDT--LEITRISRLDMGAYL 291
            :|:|.|.|..||.|  .|.|   ||..|  .|..||   ::.|....|  |.|.:.:..|.|.|.
  Fly   165 DINLTCLAMQSPVPPSFIYWYKGKRVMNYSQRGGIN---VITERSTRTSKLLIAKATPADSGNYT 226

  Fly   292 CIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNY 346
            |..|:....:|...: ::.:.|          .|.:..|.:..|......||:.:
  Fly   227 CSPSSSDSASVVVHV-INGEHP----------AAMQHGNSSATCLRPLSSTSVPF 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 32/100 (32%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 1/3 (33%)
Ig strand E 178..185 CDD:409405 2/6 (33%)
IgI_1_MuSK 218..310 CDD:409562 27/100 (27%)
Ig strand A 218..221 CDD:409562 0/2 (0%)
Ig strand A' 226..231 CDD:409562 0/4 (0%)
Ig strand B 237..244 CDD:409562 3/6 (50%)
Ig strand C 250..255 CDD:409562 2/7 (29%)
Ig strand C' 257..259 CDD:409562 1/3 (33%)
Ig strand D 267..270 CDD:409562 0/2 (0%)
Ig strand E 275..281 CDD:409562 3/7 (43%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 1/7 (14%)
IG_like 325..410 CDD:214653 5/21 (24%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/2 (0%)
Ig strand E 376..380 CDD:143207
Ig strand F 390..395 CDD:143207
Ig strand G 403..406 CDD:143207
dpr4NP_001014616.2 IG_like 53..145 CDD:214653 29/93 (31%)
Ig strand A' 55..57 CDD:409355 1/1 (100%)
Ig strand B 61..69 CDD:409355 2/7 (29%)
CDR1 69..75 CDD:409355 4/5 (80%)
Ig strand C 76..82 CDD:409355 2/5 (40%)
CDR2 85..101 CDD:409355 5/15 (33%)
Ig strand D 101..106 CDD:409355 0/4 (0%)
FR3 102..131 CDD:409355 8/30 (27%)
Ig strand E 110..117 CDD:409355 2/8 (25%)
Ig strand F 125..132 CDD:409355 4/6 (67%)
IG_like 161..>227 CDD:214653 23/68 (34%)
Ig strand B 166..170 CDD:409353 2/3 (67%)
Ig strand C 181..185 CDD:409353 1/3 (33%)
Ig strand E 206..214 CDD:409353 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.

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