DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and DIP-kappa

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster


Alignment Length:416 Identity:181/416 - (43%)
Similarity:250/416 - (60%) Gaps:34/416 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 PEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDKHDR 177
            |.|.|.|.||||..||:..:.|.|:||..|||||:..:...||::|::||::|.|||:|::.   
  Fly    74 PRFAEPIANVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYND--- 135

  Fly   178 HRTWYLHINNVHEEDRGRYMCQINTVTAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANISLRCR 242
            ||:|||||..|.|.|||.||||:||...:::.|||.|||||.|.:.|:|:|::||||.||||.|:
  Fly   136 HRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCK 200

  Fly   243 ASGSPRPIIKWKRDDNSRIAINKNHIVNEWEGDTLEITRISRLDMGAYLCIASNGVPPTVSKRIK 307
            |.|.|.|.:.|:|:|...:.|...| ||..:|:.|.||::|||.|.||||:|||||||::|||:.
  Fly   201 ARGYPEPYVMWRREDGEEMLIGGEH-VNVVDGELLHITKVSRLHMAAYLCVASNGVPPSISKRVH 264

  Fly   308 VSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGP-IIHDS----HKYKVEATV 367
            :.|.|||||.||:||.||..|.:|.:||.|||:|.|:||||...|. ||.|:    .||:..:||
  Fly   265 LRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMIISDTSRAGDKYETTSTV 329

  Fly   368 GLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPPTTASSGIYSTDTHWGENG 432
            .  .|..:|||.|..|...|.|.|:|||||..|||||.|:|.....||||.....|.        
  Fly   330 S--GYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPTTAIISEMSL-------- 384

  Fly   433 INNNYAYGGPDSTRSIYAQDKNTRYQSN-LNEIGLSEQKSFLDKTQ-NPLLANGNANEADAESNG 495
            :|.:|     |..|    :.:|....:| |.:.|:.|.:   |..| |....||:.|:....:..
  Fly   385 LNRSY-----DGKR----RHRNKFDSANALPDYGVEEWR---DGAQGNNAGNNGDNNQTPVRNPP 437

  Fly   496 ARGHNPSMAIAWLFVVIATLLLTIRS 521
            ...||.:.::| ...::|.::|.|::
  Fly   438 GAFHNSAGSLA-QHNLLAKIMLGIKT 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 47/95 (49%)
Ig strand B 130..134 CDD:409405 0/3 (0%)
Ig strand C 143..147 CDD:409405 3/3 (100%)
Ig strand E 178..185 CDD:409405 5/6 (83%)
IgI_1_MuSK 218..310 CDD:409562 47/91 (52%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 2/4 (50%)
Ig strand B 237..244 CDD:409562 4/6 (67%)
Ig strand C 250..255 CDD:409562 1/4 (25%)
Ig strand C' 257..259 CDD:409562 1/1 (100%)
Ig strand D 267..270 CDD:409562 1/2 (50%)
Ig strand E 275..281 CDD:409562 2/5 (40%)
Ig strand F 288..295 CDD:409562 4/6 (67%)
Ig strand G 302..310 CDD:409562 3/7 (43%)
IG_like 325..410 CDD:214653 43/89 (48%)
Ig strand B 331..335 CDD:143207 1/3 (33%)
Ig strand C 344..348 CDD:143207 2/3 (67%)
Ig strand E 376..380 CDD:143207 3/3 (100%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 2/2 (100%)
DIP-kappaNP_723828.1 IG_like 82..174 CDD:214653 47/94 (50%)
Ig strand B 91..95 CDD:409353 0/3 (0%)
Ig strand C 104..108 CDD:409353 3/3 (100%)
Ig strand E 139..143 CDD:409353 3/3 (100%)
Ig strand F 153..158 CDD:409353 3/4 (75%)
Ig strand G 165..168 CDD:409353 0/2 (0%)
Ig 176..267 CDD:472250 47/91 (52%)
Ig strand B 195..199 CDD:409301 3/3 (100%)
Ig strand C 208..212 CDD:409301 0/3 (0%)
Ig strand E 232..236 CDD:409301 1/3 (33%)
Ig strand F 246..251 CDD:409301 4/4 (100%)
Ig strand G 260..263 CDD:409301 2/2 (100%)
IG_like 282..368 CDD:214653 42/87 (48%)
Ig strand B 288..292 CDD:409353 1/3 (33%)
Ig strand C 301..305 CDD:409353 2/3 (67%)
Ig strand E 330..340 CDD:409353 4/11 (36%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
Ig strand G 363..366 CDD:409353 2/2 (100%)

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