Protein Alignment DIP-zeta and Lsamp

DIOPT Version :10

• Sequence 1: NP_723441.2
• Gene: DIP-zeta / 34231
• FlyBaseID: FBgn0051708
• Length: 532
• Species: Drosophila melanogaster
• Sequence 2: NP_001401926.1
• Gene: Lsamp / 29561
• RGDID: 71102
• Length: 378
• Species: Rattus norvegicus
• Alignment Length: 364
• Identity: 111/364 - (30%)
• Similarity: 165/364 - (45%)
• Gaps: 52/364 - (14%)

  Fly   100 NVPTSNLN--------IVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILT 156
            |.|.:.:|        :.|...:|....:|:||..|....|.|.|::..| ||||::  :|.|:.
  Rat    28 NQPPAEVNLSPITIPGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNS-KVAWLN--RSGIIF 89

  Fly   157 VHNHVITRNPRISVTHDKHDRHRTWY-LHINNVHEEDRGRYMCQINTV-TAKTQFGYLNVVVPPN 219
            ..:...:.:||:.:    ..||...| |.|..|...|.|.|.|.:.|. ..||...||.|.|||.
  Rat    90 AGHDKWSLDPRVEL----EKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPK 150

  Fly   220 IDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDDNSRIAINKNHIV---NEWEGDT--LEI 279
            |  |..||||.|.||:|::|.|.|:|.|.|:|.|:            |:.   .|:||:.  |||
  Rat   151 I--SNISSDVTVNEGSNVTLVCMANGRPEPVITWR------------HLTPLGREFEGEEEYLEI 201

  Fly   280 TRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSL 344
            ..|:|...|.|.|.|:|.|.....|::||:|::|| .:...:...|..|...:::|...|.|...
  Rat   202 LGITREQSGKYECKAANEVSSADVKQVKVTVNYPP-TITESKSNEATTGRQASLKCEASAVPAPD 265

  Fly   345 NYWTRGEGPIIHDSHKYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLY 409
            ..|.| :...|:.::..::::|.|      ...||:.||:....|.|.|||.|..|.|:..:.|:
  Rat   266 FEWYR-DDTRINSANGLEIKSTEG------QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLF 323

  Fly   410 VSYPPTTASSGIYSTDTHWGENGINNNYAYGGPDSTRSI 448
            ....||....        ..|.|...::...||.|.|.|
  Rat   324 KRVLPTVPHP--------IQEIGTTVHFKQKGPGSVRGI 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DIP-zeta	NP_723441.2	IG_like	120..216	CDD:214653	32/97 (33%)
		Ig strand B	130..134	CDD:409405	1/3 (33%)
		Ig strand C	143..147	CDD:409405	3/3 (100%)
		Ig strand E	178..185	CDD:409405	3/7 (43%)
		IgI_1_MuSK	218..310	CDD:409562	37/96 (39%)
		Ig strand A	218..221	CDD:409562	1/2 (50%)
		Ig strand A'	226..231	CDD:409562	4/4 (100%)
		Ig strand B	237..244	CDD:409562	2/6 (33%)
		Ig strand C	250..255	CDD:409562	2/4 (50%)
		Ig strand C'	257..259	CDD:409562	0/1 (0%)
		Ig strand D	267..270	CDD:409562	1/5 (20%)
		Ig strand E	275..281	CDD:409562	3/7 (43%)
		Ig strand F	288..295	CDD:409562	3/6 (50%)
		Ig strand G	302..310	CDD:409562	3/7 (43%)
		IG_like	325..410	CDD:214653	23/84 (27%)
		Ig strand B	331..335	CDD:143207	0/3 (0%)
		Ig strand C	344..348	CDD:143207	0/3 (0%)
		Ig strand E	376..380	CDD:143207	1/3 (33%)
		Ig strand F	390..395	CDD:143207	2/4 (50%)
		Ig strand G	403..406	CDD:143207	0/2 (0%)
Lsamp	NP_001401926.1	Ig	55..145	CDD:472250	31/96 (32%)
		Ig strand B	66..70	CDD:409382	1/3 (33%)
		Ig strand C	78..82	CDD:409382	3/3 (100%)
		Ig strand E	111..115	CDD:409382	2/3 (67%)
		Ig strand F	125..130	CDD:409382	2/4 (50%)
		Ig strand G	138..141	CDD:409382	1/2 (50%)
		Ig_3	148..218	CDD:464046	33/83 (40%)
		Ig_3	235..311	CDD:464046	21/83 (25%)