DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Cntn6

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_037357.1 Gene:Cntn6 / 27256 RGDID:62008 Length:1028 Species:Rattus norvegicus


Alignment Length:485 Identity:103/485 - (21%)
Similarity:163/485 - (33%) Gaps:153/485 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IVVEEPEFTEYIENVTVP---AGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRIS 169
            |.::||      ::|..|   :...:.|.|:.....|....|.........::..|.......::
  Rat    27 IFIQEP------QDVIFPLDLSRSEIILSCTASGYPSPHYRWKQNGTDIDFSMTYHYRLDGGSLA 85

  Fly   170 VTHDKHDRHRTWYLHINNVHEEDRGRYMC----QINTV---TAKTQFGYLNVVVPPNIDD--SLS 225
            ::..:.|              :|.|.|.|    .:.|:   .||.||.|        |:|  :.|
  Rat    86 ISSPRTD--------------QDIGIYQCLATNPVGTILSRKAKLQFAY--------IEDFETKS 128

  Fly   226 SSDVIVREGANISLRCRASGSPRP-----IIKWKRDDNS-RIAINKNHIVNEWEGDTLEITRISR 284
            .|.|.||||..:.|.|    .|.|     ...|..:||. .:..:|...|::..|: |.|.::..
  Rat   129 RSTVSVREGQGVVLLC----GPPPHFGELSYDWTFNDNPLYVQEDKRRFVSQNTGN-LYIAKVEP 188

  Fly   285 LDMGAYLCIASN--------GVPPTVSKRI---------KVSVDFPPMLLIPHQLVGAPEGFNVT 332
            .|:|.|.|..:|        |.|..:.:|.         |:.|.||       :.:.|.:..:|.
  Rat   189 SDVGNYTCFVTNKEAHRSVQGPPTPLVQRTDGVMGEYEPKIEVRFP-------ETIQAAKDSSVK 246

  Fly   333 IECFTEAHPTSLNYWTRGEGPIIHDSHKY-KVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAK 396
            :|||...:|.....|.|.:|..:....|| ..:||:.:|.::..           |:|.|:|||.
  Rat   247 LECFALGNPVPDISWRRLDGSPMPGKVKYSNSQATLEIPKFQQE-----------DEGFYECVAG 300

  Fly   397 NPRGETDGIIRLYVSYPPTTASSGIYSTDTHWGENGINNNY------------AYGGPD------ 443
            |.||......:|....||            .| |..|.|.|            |.|.|:      
  Rat   301 NLRGRNLAKGQLIFYAPP------------EW-EQKIQNTYLSIYDSLFWECKASGNPNPSYTWL 352

  Fly   444 --------------------------STRSIYAQDKNTRYQSNLNEIGLSEQKSFLDKTQNPL-- 480
                                      |...||......:||:......|....|..|.::||:  
  Rat   353 KNGERLNTEERIQTENGTLIITMLNVSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKK 417

  Fly   481 ---LANGNANEADAESNGARGHNPSMAIAW 507
               :..|.....:.:.|..    |..:|:|
  Rat   418 ISVVQVGGDISIECKPNAF----PKASISW 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 18/105 (17%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 0/3 (0%)
Ig strand E 178..185 CDD:409405 0/6 (0%)
IgI_1_MuSK 218..310 CDD:409562 30/116 (26%)
Ig strand A 218..221 CDD:409562 0/2 (0%)
Ig strand A' 226..231 CDD:409562 2/4 (50%)
Ig strand B 237..244 CDD:409562 2/6 (33%)
Ig strand C 250..255 CDD:409562 1/4 (25%)
Ig strand C' 257..259 CDD:409562 1/1 (100%)
Ig strand D 267..270 CDD:409562 0/2 (0%)
Ig strand E 275..281 CDD:409562 2/5 (40%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 2/16 (13%)
IG_like 325..410 CDD:214653 24/85 (28%)
Ig strand B 331..335 CDD:143207 1/3 (33%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 0/3 (0%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
Cntn6NP_037357.1 Ig 26..120 CDD:472250 20/112 (18%)
Ig strand B 46..50 CDD:409353 1/3 (33%)
Ig strand C 59..63 CDD:409353 0/3 (0%)
Ig strand E 82..86 CDD:409353 0/3 (0%)
Ig strand F 97..102 CDD:409353 2/4 (50%)
Ig strand G 111..114 CDD:409353 0/2 (0%)
Ig 129..214 CDD:472250 25/89 (28%)
Ig strand B 140..144 CDD:409353 1/3 (33%)
Ig strand C 154..158 CDD:409353 0/3 (0%)
Ig strand E 179..183 CDD:409353 2/4 (50%)
Ig strand F 193..198 CDD:409353 2/4 (50%)
Ig strand G 209..212 CDD:409353 1/2 (50%)
Ig 227..315 CDD:472250 28/105 (27%)
Ig strand B 245..249 CDD:409353 1/3 (33%)
Ig strand C 258..262 CDD:409353 0/3 (0%)
Ig strand E 280..284 CDD:409353 2/3 (67%)
Ig strand F 294..299 CDD:409353 2/4 (50%)
Ig strand G 307..310 CDD:409353 0/2 (0%)
Ig 319..403 CDD:472250 14/84 (17%)
Ig strand B 335..339 CDD:143205 0/3 (0%)
Ig strand C 348..352 CDD:143205 0/3 (0%)
Ig strand E 369..373 CDD:143205 0/3 (0%)
Ig strand F 383..388 CDD:143205 2/4 (50%)
Ig strand G 396..399 CDD:143205 0/2 (0%)
Ig5_Contactin 408..496 CDD:409358 8/40 (20%)
Ig strand A 408..413 CDD:409358 1/4 (25%)
Ig strand A' 416..421 CDD:409358 0/4 (0%)
Ig strand B 425..432 CDD:409358 0/6 (0%)
Ig strand C 440..444 CDD:409358 2/4 (50%)
Ig strand D 458..461 CDD:409358
Ig strand E 462..467 CDD:409358
Ig strand F 475..483 CDD:409358
Ig strand G 489..496 CDD:409358
Ig 500..598 CDD:472250
Ig strand B 517..521 CDD:409353
Ig strand C 532..536 CDD:409353
Ig strand E 560..564 CDD:409353
Ig strand F 574..579 CDD:409353
Ig strand G 587..590 CDD:409353
FN3 598..691 CDD:238020
FN3 <620..>912 CDD:442628
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 887..908
FN3 903..983 CDD:214495
Blue background indicates that the domain is not in the aligned region.

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