DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Lsamp

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_030104997.1 Gene:Lsamp / 268890 MGIID:1261760 Length:392 Species:Mus musculus


Alignment Length:346 Identity:108/346 - (31%)
Similarity:159/346 - (45%) Gaps:44/346 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 VEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAILTVHNHVITRNPRISVTHDK 174
            |...:|....:|:||..|....|.|.|::..| ||||::  :|.|:...:...:.:||:.:    
Mouse    60 VRSVDFNRGTDNITVRQGDTAILRCVVEDKNS-KVAWLN--RSGIIFAGHDKWSLDPRVEL---- 117

  Fly   175 HDRHRTWY-LHINNVHEEDRGRYMCQINTV-TAKTQFGYLNVVVPPNIDDSLSSSDVIVREGANI 237
            ..||...| |.|..|...|.|.|.|.:.|. ..||...||.|.|||.|  |..||||.|.||:|:
Mouse   118 EKRHALEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQVYLIVQVPPKI--SNISSDVTVNEGSNV 180

  Fly   238 SLRCRASGSPRPIIKWKRDDNSRIAINKNHIV---NEWEGDT--LEITRISRLDMGAYLCIASNG 297
            :|.|.|:|.|.|:|.|:            |:.   .|:||:.  |||..|:|...|.|.|.|:|.
Mouse   181 TLVCMANGRPEPVITWR------------HLTPLGREFEGEEEYLEILGITREQSGKYECKAANE 233

  Fly   298 VPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTRGEGPIIHDSHKYK 362
            |.....|::||:|::|| .:...:...|..|...:::|...|.|.....|.| :...|:.::..:
Mouse   234 VSSADVKQVKVTVNYPP-TITESKSNEATTGRQASLKCEASAVPAPDFEWYR-DDTRINSANGLE 296

  Fly   363 VEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYPPTTASSGIYSTDTH 427
            :::|.|      ...||:.||:....|.|.|||.|..|.|:..:.|:....||....        
Mouse   297 IKSTEG------QSSLTVTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPTVPHP-------- 347

  Fly   428 WGENGINNNYAYGGPDSTRSI 448
            ..|.|...::...||.|.|.|
Mouse   348 IQEIGTTVHFKPKGPGSVRGI 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 32/97 (33%)
Ig 130..200 CDD:143165 22/70 (31%)
I-set 226..310 CDD:254352 34/88 (39%)
IGc2 233..298 CDD:197706 25/69 (36%)
Ig 313..410 CDD:299845 25/96 (26%)
IG_like 325..410 CDD:214653 23/84 (27%)
LsampXP_030104997.1 Ig 69..159 CDD:386229 31/96 (32%)
Ig_3 163..232 CDD:372822 32/82 (39%)
Ig_3 250..325 CDD:372822 20/82 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167833575
Domainoid 1 1.000 45 1.000 Domainoid score I12107
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I4449
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D265311at33208
OrthoFinder 1 1.000 - - FOG0000150
OrthoInspector 1 1.000 - - mtm8732
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X97
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.900

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