DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and Ptprq

DIOPT Version :9

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001357916.1 Gene:Ptprq / 237523 MGIID:1096349 Length:2301 Species:Mus musculus


Alignment Length:330 Identity:62/330 - (18%)
Similarity:118/330 - (35%) Gaps:99/330 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 VTAKTQFGY-----LNVVVPPNIDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDDNSRIA 262
            |.|:|..|.     |:|..||::..::....::..|...|.:..|....|..||...|   .:::
Mouse   375 VAAETSAGVGPKSNLSVFT
PPDVPGAVFDLQIVEVEATEIRVSWRKPRQPNGIISQYR---VKVS 436

  Fly   263 INKNHIVNEWEGDTLEITRISRLDMGAYLCIASNGVPPTVSKRIKVSV----------------- 310
            :.::.::       ||.|.::..|  .|:   :|.:.|.:...:...:                 
Mouse   437 VLESGVI-------LENTLLTGQD--EYI---NNPMTPEIMNLVDPMIGFYEGSGEMSSDLHSLA 489

  Fly   311 ---------DFPPMLLIPHQ----LVGAPEGFNVTIEC------------FTEAHPTSLNYWT-R 349
                     |||....:..|    :|.....:...|..            ||| |..|::.:| .
Mouse   490 SFIYNSHPHDFPARTRVEDQRSPVVVATRNQYMTDIAAEHLSYVIRRLVPFTE-HTISVSAFTVM 553

  Fly   350 GEGP--IIHDSHKYKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSY 412
            ||||  ::....:.:|.:::.:..||        |:||....:|....:.|.|:    |..|..|
Mouse   554 GEGPPTVLTVRTREQVPSSIQIINYK--------NISSSSILLYWDPPEYPNGK----ITHYTIY 606

  Fly   413 PPTTASSGIYSTDTHWGENGINNNYAYGGPDSTRSIYAQDKNTRYQ------SNLNEIGLSEQKS 471
            .....::..:...|      ::|::...|         ..|.|||:      :::.|..|||:..
Mouse   607 AMELDTNRAFQMTT------VDNSFLITG---------LKKYTRYKMRVAASTHVGESSLSEEND 656

  Fly   472 FLDKT 476
            ...:|
Mouse   657 LFVRT 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 6/17 (35%)
Ig 130..200 CDD:143165
I-set 226..310 CDD:254352 14/83 (17%)
IGc2 233..298 CDD:197706 13/64 (20%)
Ig 313..410 CDD:299845 24/115 (21%)
IG_like 325..410 CDD:214653 21/99 (21%)
PtprqNP_001357916.1 FN3 57..151 CDD:238020
FN3 308..393 CDD:238020 6/17 (35%)
fn3 399..>441 CDD:365830 7/44 (16%)
FN3 570..654 CDD:238020 21/110 (19%)
fn3 668..744 CDD:365830
FN3 762..850 CDD:238020
fn3 857..934 CDD:365830
FN3 951..1049 CDD:238020
FN3 1056..1137 CDD:238020
FN3 1152..1233 CDD:238020
FN3 1247..1337 CDD:238020
FN3 1342..1421 CDD:238020
FN3 1432..1535 CDD:238020
FN3 1542..1638 CDD:238020
FN3 1645..1734 CDD:238020
UP_III_II 1759..1928 CDD:297589
R-PTPc-Q 2033..2256 CDD:350464
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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