DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and wrk-1

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:NP_001024651.1 Gene:wrk-1 / 181093 WormBaseID:WBGene00006942 Length:452 Species:Caenorhabditis elegans


Alignment Length:488 Identity:91/488 - (18%)
Similarity:163/488 - (33%) Gaps:108/488 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GVIVAGGGANVPTSNLNIVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAIL 155
            |:::|...|.:.|....::.:|              |.::.|.|.|:: .|..:.|.  :.:.::
 Worm    10 GLLIASTSAQIRTKGGTLIAKE--------------GESLTLRCEVED-PSVAIIWR--KNTEVV 57

  Fly   156 TVHNHVITRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYMCQIN------TVTAKTQ-FGYLN 213
            .|.:.::.......::.:    ..|..|.|..|...:...|.|.:.      |...|.| |....
 Worm    58 AVDDEILDTYGGYEISME----GSTSVLTIKRVEPINSANYSCALAEPEVSVTFVIKVQVFKPTQ 118

  Fly   214 VVVPPNIDDSLSSSDVIVREG-ANISLRCRA-SGSPRPIIKWKRDDNSRIAINKNHIVNEWEGDT 276
            |.|.|.:..|..:.....|.| .|:.:.|.. .|:|:|.:.|.:    :.|.....|..|..|..
 Worm   119 VSVKPLVVISPDTGVYHARVGEKNLVITCHVKEGNPKPGVVWTK----QAAKLPEDIKREHGGAR 179

  Fly   277 LEITRISRLDMGAYLCIASNGVPPTVSKRIKVSVDFP--------PMLLIPHQLVGAPEGFNVTI 333
            :.||.:.:...|.|.|:|.| :..:....|.:.|..|        |.:......:...:..|.:.
 Worm   180 IVITEVKKHHAGKYNCLAEN-IAGSDRATIDIHVAEPLQGEREEKPWVKNEDTFIPVRKNQNASF 243

  Fly   334 ECFTEAHPTSLNYWTRGEGPIIHDSHKYK--VEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAK 396
            .|..:..|.....|......|..:..|:|  .|....|..| :...||:.::|....|.|.|...
 Worm   244 WCTYDGTPVPQVEWLFNGYKINFNDEKFKKTSETAQRLNGY-SKSTLTVGDISEEAFGDYACRIS 307

  Fly   397 NPRGETDGIIRLYVSYPPTTASSGIYSTDTHWGENGINNNYAYGGPDSTRSIYAQDKNTRYQ--- 458
            |..|....::  :||..|.........::..|                  ::.|.||...||   
 Worm   308 NKLGSVTAVV--HVSGRPGPPQLSFDESELTW------------------TVRAFDKILEYQLCH 352

  Fly   459 ----------SNLNEIGLSEQ--------------KSFLD---------KTQNPLLANGNANEA- 489
                      .:.|.:.:.:.              .:||:         |.:|.|.....|.:| 
 Worm   353 RLENADHFLPEDCNSVRVKKSDNNGDDKWTHTIDLSTFLEHGNKYHVQLKARNALGWGSMAKDAL 417

  Fly   490 -----DAESNGARGHNPSMAIAWLFVVIATLLL 517
                 ..|...|:|.:....|:.:.|.:.|:.|
 Worm   418 HVELQRIEKEEAKGASIISIISSILVTLVTMYL 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 18/102 (18%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 0/3 (0%)
Ig strand E 178..185 CDD:409405 2/6 (33%)
IgI_1_MuSK 218..310 CDD:409562 22/93 (24%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 0/4 (0%)
Ig strand B 237..244 CDD:409562 1/7 (14%)
Ig strand C 250..255 CDD:409562 1/4 (25%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 1/2 (50%)
Ig strand E 275..281 CDD:409562 1/5 (20%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 1/7 (14%)
IG_like 325..410 CDD:214653 18/86 (21%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 1/3 (33%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
wrk-1NP_001024651.1 IG_like 25..113 CDD:214653 16/108 (15%)
Ig strand B 35..39 CDD:409353 1/3 (33%)
Ig strand C 47..51 CDD:409353 0/3 (0%)
Ig strand E 77..83 CDD:409353 2/5 (40%)
Ig strand F 93..98 CDD:409353 2/4 (50%)
Ig strand G 104..107 CDD:409353 0/2 (0%)
Ig 136..212 CDD:472250 20/80 (25%)
Ig strand B 143..147 CDD:409353 0/3 (0%)
Ig strand C 157..161 CDD:409353 0/3 (0%)
Ig strand E 178..182 CDD:409353 0/3 (0%)
Ig strand F 192..197 CDD:409353 2/4 (50%)
Ig 235..319 CDD:472250 18/86 (21%)
Ig strand C 254..258 CDD:409353 0/3 (0%)
Ig strand E 278..291 CDD:409353 3/13 (23%)
Ig strand F 301..306 CDD:409353 2/4 (50%)
Ig strand G 314..317 CDD:409353 0/2 (0%)

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