DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-zeta and ntm

DIOPT Version :10

Sequence 1:NP_723441.2 Gene:DIP-zeta / 34231 FlyBaseID:FBgn0051708 Length:532 Species:Drosophila melanogaster
Sequence 2:XP_004916061.1 Gene:ntm / 100492453 XenbaseID:XB-GENE-6045425 Length:374 Species:Xenopus tropicalis


Alignment Length:329 Identity:107/329 - (32%)
Similarity:165/329 - (50%) Gaps:39/329 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 GVIVAGGGANVPTSNLNIVVEEPEFTEYIENVTVPAGRNVKLGCSVKNLGSYKVAWMHFEQSAIL 155
            ||.|..|.|..|.:              ::||||..|.:..|.|:|.|..: :|||::  :|.||
 Frog    29 GVPVRSGDAGFPKA--------------MDNVTVRQGDSAILRCTVDNRVT-RVAWLN--RSTIL 76

  Fly   156 TVHNHVITRNPRISVTHDKHDRHRTWYLHINNVHEEDRGRYMCQINTVT-AKTQFGYLNVVVPPN 219
            ...|...:.:||:.:..:...::.   :.|.||...|.|.|.|.:.|.. .||...:|.|.|||.
 Frog    77 YTGNDKWSIDPRVVLLANTKSQYS---IEIQNVDIYDEGPYTCSVQTDNHPKTSRVHLIVQVPPR 138

  Fly   220 IDDSLSSSDVIVREGANISLRCRASGSPRPIIKWKRDDNSRIAINKNHIVNEWEGDTLEITRISR 284
            |.|  .||.:.|.||:|:||.|.|:|.|.|::.|:     .::......|:  |.:.||||.|:|
 Frog   139 IVD--ISSSIAVNEGSNVSLICIANGRPEPVVNWR-----YLSPKARGFVS--EDEYLEITGITR 194

  Fly   285 LDMGAYLCIASNGVPPTVSKRIKVSVDFPPMLLIPHQLVGAPEGFNVTIECFTEAHPTSLNYWTR 349
            ...|.|.|.|||.|.....:|:|::|::||.:| ..|.:|||.|....::|...|.|.:..:|.:
 Frog   195 EQSGIYECSASNDVSAPDVRRVKLTVNYPPYIL-DAQNIGAPLGHRGILQCEASAVPAADFFWYK 258

  Fly   350 GEGPIIHDSHK-YKVEATVGLPAYKTHMKLTIINVSSGDDGIYKCVAKNPRGETDGIIRLYVSYP 413
             |...:.||.: .|||..      :|..::|.:|||..|.|.|.|:|||..|.::..|.|:..:.
 Frog   259 -EDKRLSDSWRGVKVENR------ETISRVTFLNVSEQDYGNYTCMAKNLLGHSNASIILFELFQ 316

  Fly   414 PTTA 417
            .|::
 Frog   317 STSS 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-zetaNP_723441.2 IG_like 120..216 CDD:214653 30/96 (31%)
Ig strand B 130..134 CDD:409405 1/3 (33%)
Ig strand C 143..147 CDD:409405 2/3 (67%)
Ig strand E 178..185 CDD:409405 0/6 (0%)
IgI_1_MuSK 218..310 CDD:409562 34/91 (37%)
Ig strand A 218..221 CDD:409562 1/2 (50%)
Ig strand A' 226..231 CDD:409562 2/4 (50%)
Ig strand B 237..244 CDD:409562 3/6 (50%)
Ig strand C 250..255 CDD:409562 1/4 (25%)
Ig strand C' 257..259 CDD:409562 0/1 (0%)
Ig strand D 267..270 CDD:409562 0/2 (0%)
Ig strand E 275..281 CDD:409562 3/5 (60%)
Ig strand F 288..295 CDD:409562 3/6 (50%)
Ig strand G 302..310 CDD:409562 2/7 (29%)
IG_like 325..410 CDD:214653 28/85 (33%)
Ig strand B 331..335 CDD:143207 0/3 (0%)
Ig strand C 344..348 CDD:143207 0/3 (0%)
Ig strand E 376..380 CDD:143207 0/3 (0%)
Ig strand F 390..395 CDD:143207 2/4 (50%)
Ig strand G 403..406 CDD:143207 0/2 (0%)
ntmXP_004916061.1 Ig 45..133 CDD:472250 29/93 (31%)
Ig strand B 54..58 CDD:409353 1/3 (33%)
Ig strand C 66..70 CDD:409353 2/3 (67%)
Ig strand E 99..103 CDD:409353 0/6 (0%)
Ig strand F 113..118 CDD:409353 2/4 (50%)
Ig strand G 126..129 CDD:409353 1/2 (50%)
Ig_3 136..206 CDD:464046 30/78 (38%)
ig 227..311 CDD:395002 30/91 (33%)
Ig strand B 240..244 CDD:409353 0/3 (0%)
Ig strand C 253..257 CDD:409353 0/3 (0%)
Ig strand E 279..283 CDD:409353 0/3 (0%)
Ig strand F 293..298 CDD:409353 2/4 (50%)

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