DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tsp29Fa and lbm

DIOPT Version :8

Sequence 1:NP_001162915.1 Gene:Tsp29Fa / 34211 FlyBaseID:FBgn0032074 Length:248 Species:Drosophila melanogaster
Sequence 2:NP_001260757.1 Gene:lbm / 35623 FlyBaseID:FBgn0016032 Length:208 Species:Drosophila melanogaster

Alignment Length:226 Identity:44/227 (19%)
Similarity:88/227 (39%) Gaps:45/227 (20%)


  Fly    24 ITGIILIAV--GAGVGAV-YTGYKLFLAGKFFSIPTFLIVIGSFIIIISFFGCWGALKENYCLVL 85
            |..|:|.||  ....||: :..|......:.|.|..::..  |.|::.:..|.:.|::|:..|..
  Fly    10 IASIVLNAVLGFLAAGAIGWIAYNADTETEEFVIAAYIAC--SLILVFALLGIFAAIRESVVLTA 72

  Fly    86 SFSVMLAIIFILELAAGISGYVLRNDASDLIKTSLTYSLNEYNSINPNATTKL-W-----DDIQD 144
            :.:|.|.|:.||:                ::.|.|  .|:|::..:.....:: |     |.:|.
  Fly    73 TSAVFLLILAILQ----------------IVSTCL--FLHEFDVKSGRDMVEVAWQANNMDSLQQ 119

  Fly   145 EFECCGVTSYNDWITAFPNGDLPISCCNVHVGAVGTFTC-NNAQSSVADRHKVGCLDGFSGYISA 208
            :.||||.:|..|:|               |:..:...:| .:.|.:....:..||::....:..:
  Fly   120 KHECCGQSSAQDYI---------------HLSLLIPPSCYADLQQTPDHLYLDGCIEKVQSFYES 169

  Fly   209 HAVSLGAAGVVIAILQFFGVIFACYIAREIK 239
            ..:.......|:...:......|.::|...|
  Fly   170 DKLRFIIVSWVLVAFELICFALAVFLAISFK 200

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Tsp29FaNP_001162915.1 Tetraspannin 11..238 CDD:278750 43/224 (19%)
tetraspanin_LEL 106..210 CDD:239401 19/111 (17%)
lbmNP_001260757.1 Tetraspannin 8..198 CDD:278750 43/223 (19%)
tetraspanin_LEL <109..169 CDD:239401 15/75 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 C122030114
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR19282
RoundUp 00.000 Not matched by this tool.
22.030

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