DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManVI and Man2b2

DIOPT Version :10

Sequence 1:NP_609253.1 Gene:LManVI / 34206 FlyBaseID:FBgn0032069 Length:1007 Species:Drosophila melanogaster
Sequence 2:NP_001128443.2 Gene:Man2b2 / 360955 RGDID:1308840 Length:1004 Species:Rattus norvegicus


Alignment Length:1147 Identity:309/1147 - (26%)
Similarity:478/1147 - (41%) Gaps:296/1147 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 GIVLFVALLA-------ISVRPSEEACGYEACPKTKTNMINIHMVPHSHDDVGWLKTVDQYFYGH 63
            |::.::.||.       ::.||        |.|      |...:|||||.||||:.||.:....:
  Rat     2 GLLRWLPLLGQLLLLWPLAARP--------ASP------IRAFVVPHSHMDVGWVYTVQESMRAY 52

  Fly    64 RSNIQHAGVQYIIDTVIAELIKDPARRFIQVETSFFAKWW-AEQSETAKQVVRKLVNEGRLEFTG 127
            .:|        :..||:.||::...||||.||..||..|| ...||..||.||:|::||||||..
  Rat    53 AAN--------VYTTVVEELVRGRQRRFIAVEQEFFRLWWDGVASEQQKQQVRQLLDEGRLEFVL 109

  Fly   128 GAWSMNDEAAVNYQSVIDQFTLGLKFLDDTFGSCARPRIGWQIDPFGHSREQASIFAQMGYDGEF 192
            |...|:|||..:....|.|.|.|..||.:|||  .||:..|.:||||.|....::||..|::...
  Rat   110 GGQVMHDEAVTHLDDQILQLTEGHGFLYETFG--IRPQFSWHVDPFGASATTPTLFALAGFNAHL 172

  Fly   193 FARMDHRDKNDRIDNLGMEMIWDASDSLS-NDEIFTGL--LYRHYSAPPGYCFDVHCG------- 247
            .:|:|:..|:...:..|::.:|..|.||| ..||:|.:  || .|..|....|....|       
  Rat   173 ISRIDYDLKDAMQEAQGLQFVWHGSPSLSEQQEIYTHVMDLY-SYCTPSHIPFSNRSGFYWNGVA 236

  Fly   248 --------------DDPIIDTKSYDN----------NVKSRVDDFLSYVTSVAQHYRSNHIMIPM 288
                          .:|:    :.||          |||.|           |..:|:.|::.|.
  Rat   237 VFPEPPPDGVYPNMSEPV----TVDNIHLYAEALVANVKQR-----------AAWFRTPHVLWPW 286

  Fly   289 GDDFQYEDAQVNFKNMDKLIKYVNERQAEGSTFNLFYSTPACYLNSLHEGLQTWPNKT-QDFFPY 352
            |.|.|:.:|.|.|.|||.|::|:|.|.|:.. .::.|:|...|..:||:...||..:. .||.||
  Rat   287 GCDKQFFNASVQFDNMDPLLEYINNRSAQFG-ISVQYATLNDYFQALHDFNVTWDIRDHHDFLPY 350

  Fly   353 GSDDNSYWTGYFTSRPTQKRFERDGNHILQVAKQLSVFAE---------LNTKQQKEDLEYLREI 408
            .|:....|||:||||.|.|...|..:.:|...:  |:|..         |:.....:.|:.||..
  Rat   351 SSEPQQAWTGFFTSRSTLKGLARQASALLYAGE--SMFTRYMWPHPRGTLDPTWALQQLQQLRWA 413

  Fly   409 MGVMQHHDAITGTEKQHVSDDYDRILYDAILGGVNTARDGLRKL-----TNLPNGEFESCLQLNI 468
            :..:||||||||||...|.:.|        :..::....|:.||     .:.|.|.......:..
  Rat   414 VSEVQHHDAITGTESPKVKNMY--------MEHLSMGMRGVHKLMASIALDRPPGSGTDTRPVGY 470

  Fly   469 SECAFTKDDADNVVVTLYNPLAHTSTQYVRVPVKNENYEVTDEKGRVVASEVVPVAWQVLALEFR 533
            |             .::|||||...|..:.:.|...:..||||.||.|::::             
  Rat   471 S-------------ASVYNPLAWKITTIITLTVAFPSVSVTDELGRPVSAQI------------- 509

  Fly   534 NNDTQ----HELVFKASVDKIA--NYYIKKVASQETKNVAAHTKSKRSIKAEEANLEVPKRFKKV 592
            .|.|:    ::|:...::..::  :|.:::     |:...|.|   |.:....||     ..|..
  Rat   510 QNSTKDPSAYDLLILTTIPGLSYRHYKVRR-----TRGDQAGT---RELVTPRAN-----TLKFS 561

  Fly   593 HSLKNATETFDDDEGETVVQTSQ--VKLVIDNKTGLLKTVE--MNGVSENIDQSYGVYRTYD--- 650
            ..|:|.|    ..||:.:|....  ..|:.|..|.:|.:::  .:..:.::.|.:..||...   
  Rat   562 RKLRNQT----SQEGKLLVPVMNDCYTLLFDQDTNMLHSIQDRQSNRTVHMTQEFLEYRANGDVK 622

  Fly   651 ----SGAYVFRQYHQADFIVQYEGVEFTVYDGALVKEVHQQFSEYISQVIRIYE----------- 700
                |..|:|.....|:...:..|:|..|  |.|..:|.|.|...|:....||.           
  Rat   623 QGPISDNYLFASNDTAEPSWEAVGMEMVV--GTLATDVRQYFYRNITDQGYIYSIHTRLAHVHPS 685

  Fly   701 --GKNL---VEIEWQVGPIEREEEFGREVVIIFNSTIASDGVSYTDSNGREMIKRVKDQRETFTP 760
              |:.|   :|.::||||:    :..||.::..:|.:.|..|.|:|:||.:|      ||..: .
  Rat   686 LAGELLCRRIEQQYQVGPL----DLNREAILRTSSDLNSQQVLYSDNNGYQM------QRRPY-K 739

  Fly   761 GLDRQPTAANYYPVTSRIALQDSKKRIAVLNDRAQGGASMLNGQLELMLHRR----LVRDDGYGV 821
            .....|...||||:.....::|.|.|:.:|.:|..|.:|..|||:|:|||||    ||.|..|.:
  Rat   740 AFKSNPIPRNYYPMVQSAFIEDDKSRLVLLAERPHGVSSQENGQVEVMLHRRLWNNLVWDLNYNL 804

  Fly   822 GEALNEEKYGQPMIARGKVYLILSPSDESTAAE-------------------REAEKEIH----- 862
              .||:.....|::     :|:|.|...:||..                   .|.|..||     
  Rat   805 --TLNDTSVVHPVL-----WLLLGPKSTTTALRPRSGVALQHRPVVLLKELTDEEETAIHRPHHP 862

  Fly   863 ---------------LPFWKFFSKNTGSTTAAAKSVPSFNDFPKSVHLLTLE-------PFNDDE 905
                           ||.|: :|:|                  .:.||..|:       ..|...
  Rat   863 WPVTLPPSLHLQVLSLPGWQ-YSRN------------------HAQHLKNLQRGHPEKPQVNLQR 908

  Fly   906 VLLRVENFLDHTEGQVVSFNIRP----IFDYLNG----VEIRETTLDGNLPLSDMKRFKFHHDSS 962
            ||||:.:..:..|..|:|   ||    :...|.|    |.:.|.:|.|...:..::|:.: ....
  Rat   909 VLLRLHHLYEAGEDPVLS---RPATVDLKIALRGLGSVVAVEERSLTGTWDVQTLQRWHW-RTKI 969

  Fly   963 GQKPDAVEYFTSAHKPLAAEQSQEASEFSVTLHPMQIRTFII 1004
            ||        ...| |.:..:|...|  .:|::|.:||||.|
  Rat   970 GQ--------LKGH-PTSPPRSPGGS--IITVYPKEIRTFFI 1000

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManVINP_609253.1 GH38N_AMII_LAM_like 38..312 CDD:212121 105/308 (34%)
PLN02701 40..898 CDD:178304 270/983 (27%)
Man2b2NP_001128443.2 PLN02701 27..792 CDD:178304 247/857 (29%)
GH38N_AMII_Epman_like 27..352 CDD:212122 119/351 (34%)

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