DRSC/TRiP Functional Genomics Resources

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Protein Alignment LManIV and aman-3

DIOPT Version :10

Sequence 1:NP_609251.2 Gene:LManIV / 34204 FlyBaseID:FBgn0032067 Length:978 Species:Drosophila melanogaster
Sequence 2:NP_001361919.1 Gene:aman-3 / 172178 WormBaseID:WBGene00018594 Length:1046 Species:Caenorhabditis elegans


Alignment Length:1000 Identity:246/1000 - (24%)
Similarity:428/1000 - (42%) Gaps:176/1000 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 ETKANMVNIHLVPHSHNDVGWLKTVDQSYYGYKNKIHHAGVQYILDSVVSQLLQDPKRRFIQVET 96
            :::...:.::::|.:|.|.|||:|.::         :......|||::...::::.|.||:..|.
 Worm   113 KSRTEKLKVYVLPFTHVDPGWLETFER---------YTKSTNQILDNMHQFMMKNEKMRFMWAEF 168

  Fly    97 AFFAKWWNVQSESMKKVVTKLVNEGRFEFTGGAWSMNDEANVNYQGVIDQFTVGLKFLNETFGSC 161
            .||.:||::|:|.:|:.|.|||.|||.|...|:|.|.||||..:...:|....|.:|:::.||. 
 Worm   169 VFFERWWSLQNEQVKEDVKKLVTEGRLELATGSWVMTDEANPYFPVSVDNIVEGFQFIHKNFGI- 232

  Fly   162 GRPRVGWQIDTFGHSREQAAIFAHMGYDGQFFSRMDHNDKDTRMNDLTMEMIWDASESMSGVS-- 224
             :|:..|..|.||:|.....:|...|......:|:.|..|.|..:...:...|......:|..  
 Worm   233 -KPQTMWSNDPFGYSNSVPYLFKKSGVHRTVINRIHHKLKQTLQSQKAIPFKWRQYFDATGEDDV 296

  Fly   225 LFSGMLYNFY-------SDTPGFC-FDILCTDQPIIDGDSEEN----NVKQRVDDFISYAKNVSE 277
            |...:.|..|       ||....| ||..........|...|.    ||..:.:..::..:.:||
 Worm   297 LTQILPYTHYDILNSCGSDASVCCEFDFKRMTHWSCPGPKPEKITNANVAAKAEKLVNQLEKMSE 361

  Fly   278 VYITNHIMVPMGGDFQY---EDAKVNYKNMDKLIKYINERQASGSKYNIFYSTPSCYLNSLHQSL 339
            :|....|::..|.||::   |:....:.|...:...||:    ||:..|.:.|.:.|.|    .|
 Worm   362 MYKAPVILMMHGDDFRFDMIEEWNQQHDNFIPVFDEINK----GSRVEIRFGTFTDYFN----DL 418

  Fly   340 ESW---------PNKTQDFFPYAHEKNSFWTGFFTSRPTQKR-------FERDGNHMLQVAKQLS 388
            |.|         |..:.|||||......:|||::|:||..||       ..|:|:.||.:.:   
 Worm   419 EKWYSNNKDSEPPTVSGDFFPYMCALGDYWTGYYTTRPFFKRQGRLLHSLIRNGDIMLSMLR--- 480

  Fly   389 VLANLTSEEHKID-----LDYLRQVMGVMQHHDAITGTEKQAVSDDYDRMMYEAIVGAS----NN 444
              .||  ::.||.     |:..|:.:.:.|||||||||.|.:|.|:|..:::.:||..:    |.
 Worm   481 --VNL--KQRKIGENVKRLEAARRNLALFQHHDAITGTSKVSVMDNYSELLHASIVSTNIVLENL 541

  Fly   445 ARDALRLLTNMPYG-EFESCLRLNISECAFTKDGADNVLVTLYNPLAHSSTQYVRIPVKEENYQV 508
            .:..:.|...:..| |.::.:.|..||    |:      :.::|......|...:|.|||....|
 Worm   542 TKSDIDLYPRIHDGIELQTIVDLESSE----KE------IRIFNSHLFEITDVFKIRVKEREVIV 596

  Fly   509 TDEKGRTVPSEVVPVPWQVLALEYRSNDTQHE---LVFKATVNKVSSYSIKKVESSEVKHSSIKK 570
            :.: |:.:.:::.|.        ::.:..:.:   |:|:|||..:|...:|.........:.:.|
 Worm   597 SID-GKIIEAQLEPF--------FQKSKVEKDSFLLLFQATVLPLSMMKVKVQRGDSGGLTKMAK 652

  Fly   571 INPREDN-----NSETV--------VENSVVKLVMDNHTGRLKSVEMNGVSEKI--VQNFGVYKS 620
            |..::.|     :|.|:        :|....|:..|..||.::||.....:.|.  .|:|..||.
 Worm   653 IEAKDTNAWDLGSSWTIASSTSAPNLETPYFKVSNDPITGAIQSVNKLSDNSKFHCQQSFYNYKE 717

  Fly   621 HTSCAYTFRQDGDIELFENDFEFTVYE-----GSLVKEVHQHVNDWISQV-IRIYEGVSRVELEW 679
            ....||..|      |..|..|...|:     |.|.:.::|...:.:.:: |...||.|..|::.
 Worm   718 AGGGAYLMR------LHTNPKEIIEYQWLKVSGPLRQSIYQKSTNVLQRLSIHNVEGPSGEEVDI 776

  Fly   680 MVGPIPIDDKLGSEFVTNFKSEISSNGVFYTDSNGRELMKRVKDKREDFVSDLSRQPVSGNFYPV 744
            .:. |.|..:..:|.:|.|.:: ....:.||||.|.:|::|          |..:.||..|:||:
 Worm   777 SMS-IDITKERNTELMTRFSTK-WDKPLTYTDSVGMQLLRR----------DFYKLPVQSNYYPM 829

  Fly   745 TSRIALQDDTKRLVLLNDRSQGGASLEDGALEMLIHRRHLFNDGGGVGEALNETQYGKGLIARGK 809
            .:...||...:||.::::...|...||.|.:|:.|.|....:||.|:|...:........:.. |
 Worm   830 PTAAVLQSGKQRLSIVSNVEHGARFLESGTVEINIDRILNQDDGKGLGTGPDAIPIDMKPVDM-K 893

  Fly   810 LYLILDSATDGDTVTER----------KTEKELFLPFWKFFSKTGGVEITPSKSLPDFNDL---- 860
            ..||.||.....|...|          ..:..::.|.  .|::       |.|...|..::    
 Worm   894 FKLIFDSLESDPTENSRYSTHSFRAQQAVQTIIYPPM--MFNR-------PPKKEEDIEEIEEIS 949

  Fly   861 ----PQSVHLLTLEFFSE-QEILIRFEHFLDKSEGRV------ISFNIRDIFDSLGGLAIRETTL 914
                |..:.|||:....: :::||.:.|....|..:|      :..::.|:...||...:::|.|
 Worm   950 NLKFPCDIQLLTVRPLEDNKQLLILYRHATVCSSQKVGNCGGELKSSLMDLLIKLGAKQVQKTDL 1014

  Fly   915 DG-----------NMPLSDMKRFKF 928
            .|           .:|..::|.|.|
 Worm  1015 SGVTRVGGIIKVEYLPDYELKTFDF 1039

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LManIVNP_609251.2 PLN02701 31..793 CDD:178304 214/827 (26%)
GH38N_AMII_LAM_like 39..312 CDD:212121 76/289 (26%)
aman-3NP_001361919.1 PLN02701 117..978 CDD:178304 233/933 (25%)
GH38N_AMII_GMII_SfManIII_like 118..452 CDD:212120 96/352 (27%)

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