DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and AT1G62290

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_176419.2 Gene:AT1G62290 / 842526 AraportID:AT1G62290 Length:513 Species:Arabidopsis thaliana


Alignment Length:481 Identity:166/481 - (34%)
Similarity:224/481 - (46%) Gaps:146/481 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LKEQNFVKTRQNVLAEKSYLRTKYQLPSLRS-----------VDEEQLSNSMNMAYYGAISIGTP 78
            |...|.:.||.....|:: ||:     ||||           .|...|.|.::..|||.|:||||
plant    40 LDPNNRLATRFGSKQEEA-LRS-----SLRSYNNNLGGDSGDADIVPLKNYLDAQYYGEIAIGTP 98

  Fly    79 AQSFKVLFDSGSSNLWVPSNTC-KSDACLTHNQYDSSASSTYVANGESFSIQYGTGSLTGYLSTD 142
            .|.|.|:||:|||||||||..| .|.:|..|.:|.||.||||..:|:..:|.||:||::|:.|.|
plant    99 PQKFTVIFDTGSSNLWVPSGKCFFSLSCYFHAKYKSSRSSTYKKSGKRAAIHYGSGSISGFFSYD 163

  Fly   143 TVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMVSQGLVDNSVFS 207
            .|.|..|.::.|.|.|:|:|||..|..|.|||:||:.::.:||....|.:|||:.|||:...|||
plant   164 AVTVGDLVVKDQEFIETTSEPGLTFLVAKFDGLLGLGFQEIAVGNATPVWYNMLKQGLIKRPVFS 228

  Fly   208 FYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTM-----AGSSIDGYSLC-DDCQ 266
            |:|.||..|..|||::|||.|...:.|..|:||::::|||||.|     ||.| .||  | ..|.
plant   229 FWLNRDPKSEEGGEIVFGGVDPKHFRGEHTFVPVTQRGYWQFDMGEVLIAGES-TGY--CGSGCS 290

  Fly   267 AIADTGTSLIVAP---------------------------YN----------------------- 281
            ||||:||||:..|                           |.                       
plant   291 AIADSGTSLLAGPTAVVAMINKAIGASGVVSQQCKTVVDQYGQTILDLLLAETQPKKICSQIGLC 355

  Fly   282 AY-----------------------------------------------ITLSEILNV------- 292
            ||                                               :|...|:|.       
plant   356 AYDGTHGVSMGIESVVDKENTRSSSGLRDAGCPACEMAVVWIQSQLRQNMTQERIVNYINEICER 420

  Fly   293 -----GEDGYLDCSSVSSLPDVTFNIGGTNFVLKPSAYIIQ-SDG---NCMSAFEYMGT-----D 343
                 ||.. :|||.:|.:|.|:|.|||..|.|.|..|::: .:|   .|:|.|..:..     .
plant   421 MPSPNGESA-VDCSQLSKMPTVSFTIGGKVFDLAPEEYVLKIGEGPVAQCISGFTALDIPPPRGP 484

  Fly   344 FWILGDVFIGQYYTEFDLGNNRIGFA 369
            .|||||||:|:|:|.||.||.::|||
plant   485 LWILGDVFMGKYHTVFDFGNEQVGFA 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 152/434 (35%)
AT1G62290NP_176419.2 PLN03146 7..>143 CDD:178691 47/108 (44%)
phytepsin 79..511 CDD:133162 154/436 (35%)
SapB_2 322..355 CDD:460945 1/32 (3%)
SapB_1 387..422 CDD:461575 3/34 (9%)

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