DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and AT3G51330

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_566948.1 Gene:AT3G51330 / 824296 AraportID:AT3G51330 Length:529 Species:Arabidopsis thaliana


Alignment Length:370 Identity:77/370 - (20%)
Similarity:128/370 - (34%) Gaps:101/370 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 MNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSN------------------------------- 98
            :...:|..:|:||||..|.|..|:||...|:|.|                               
plant    98 LGFLHYANVSVGTPATWFLVALDTGSDLFWLPCNCGSTCIRDLKEVGLSQSRPLNLYSPNTSSTS 162

  Fly    99 ---TCKSDACLTHNQYDSSASSTYVANGESFSIQYGTGSLTGYLSTDTV-------DVNGLSIQS 153
               .|..|.|...::..|.|||.      .:.||        |||.||.       ||..|..:.
plant   163 SSIRCSDDRCFGSSRCSSPASSC------PYQIQ--------YLSKDTFTTGTLFEDVLHLVTED 213

  Fly   154 Q---------TFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNMVSQGLVDNSVFSFY 209
            :         |.....|:.|...:.|..:|:||:..:..:|..:      :....:..|   ||.
plant   214 EGLEPVKANITLGCGKNQTGFLQSSAAVNGLLGLGLKDYSVPSI------LAKAKITAN---SFS 269

  Fly   210 LARDGTSTMGGELIFGGSDASLYSGAL--TYVPISEQGYWQFTMAGSSIDGYSLCDDCQAIADTG 272
            :.......:.|.:.||...   |:..:  ..:|......:..::...|:.|.::.....|:.|||
plant   270 MCFGNIIDVVGRISFGDKG---YTDQMETPLLPTEPSPTYAVSVTEVSVGGDAVGVQLLALFDTG 331

  Fly   273 TS----------LIVAPYNAYITLSEILNVGEDGYLDCSSVSS------LPDV--TFNIGGTNFV 319
            ||          ||...::.::|........|..:..|..:|.      .|.|  ||. ||:...
plant   332 TSFTHLLEPEYGLITKAFDDHVTDKRRPIDPELPFEFCYDLSPNKTTILFPRVAMTFE-GGSQMF 395

  Fly   320 LKPSAYIIQSDGN----CMSAFEYMGTDFWILGDVFIGQYYTEFD 360
            |:...:|:.::.|    |:...:.:.....|:|..|:..|...||
plant   396 LRNPLFIVWNEDNSAMYCLGILKSVDFKINIIGQNFMSGYRIVFD 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 77/370 (21%)
AT3G51330NP_566948.1 pepsin_retropepsin_like 102..453 CDD:472175 77/366 (21%)

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