DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-19

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001123079.1 Gene:asp-19 / 6418790 WormBaseID:WBGene00077655 Length:223 Species:Caenorhabditis elegans


Alignment Length:186 Identity:64/186 - (34%)
Similarity:102/186 - (54%) Gaps:11/186 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDAC-----LTHNQYDSSASSTYVANGESFSIQY 130
            |.|:||||.||..|..|:.|:|.||..:.|.|..|     :..::::::.|:::|....:||.:|
 Worm    41 GNITIGTPPQSASVFMDTTSANWWVIGSKCTSANCNGYSGIRKHKFNTTKSTSFVEGNRTFSTEY 105

  Fly   131 GTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFYNM 195
            |.  .||||.||||.:.||:|..|....:| ..|..|....:.||..:|:.:|:||.|.||...:
 Worm   106 GL--CTGYLGTDTVQMGGLTITKQELGIAT-IVGLGFGLKPYVGIFELAWPALSVDQVTPPMQKL 167

  Fly   196 VSQGLVDNSVFSFYL-ARDGTSTMG--GELIFGGSDASLYSGALTYVPISEQGYWQ 248
            :||..:|..:|:.:| .:|....:|  |.:.:||.|.......:|||.:|.:.:||
 Worm   168 ISQNQLDAPMFTIWLDQKDQGVYVGYTGLITYGGFDNKNCDANVTYVALSSKTFWQ 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 64/186 (34%)
asp-19NP_001123079.1 pepsin_like 40..>223 CDD:133138 62/184 (34%)

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