DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and napsa

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001005701.1 Gene:napsa / 448214 XenbaseID:XB-GENE-947098 Length:402 Species:Xenopus tropicalis


Alignment Length:393 Identity:167/393 - (42%)
Similarity:229/393 - (58%) Gaps:46/393 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVLLAALASAELHRVPILKEQNFVKTRQNVL-------AEKSYLRTKYQLPSLRSVDEEQLSNSM 65
            ::||....:..|.|:|:.|..:..:|..:.:       |.|.:|: :..:|       |:|:|.:
 Frog     7 ILLLLVWTTDALIRIPLKKFPSIRRTLSDSMTKEEFNGATKEFLK-QQTIP-------EKLTNYL 63

  Fly    66 NMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCK--SDACLTHNQYDSSASSTYVANGESFSI 128
            :..|||.|.||||.|.|.|:||:|||||||||..|.  ..||..|.:|.|..||||..|...|:|
 Frog    64 DAQYYGEIFIGTPPQKFAVIFDTGSSNLWVPSIKCSFFDFACWLHKKYRSKDSSTYQQNNTEFAI 128

  Fly   129 QYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDGVAPPFY 193
            |||||||:|:||.|||.|..:.:.:|||||:..:||..|..|:|||||||.|.:::||||.|.|.
 Frog   129 QYGTGSLSGFLSQDTVTVGSIDVANQTFAEAVKQPGIVFVFAHFDGILGMGYPNISVDGVVPVFD 193

  Fly   194 NMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQF-----TMAG 253
            ||:.|.|::.:||||||:||..:.:||||:.||:|.:.|:|...|:.::...|||.     .:|.
 Frog   194 NMMEQKLLEENVFSFYLSRDPMAMVGGELVLGGTDPNYYTGDFHYLNVTRMAYWQIKADEVRVAN 258

  Fly   254 SSIDGYSLC-DDCQAIADTGTSLIVAPYNAYITLSEILNV-----GEDGYLDCSSVSSLPDVTFN 312
            ..:    || ..||||.|||||||..|......|.:.:..     || .:::|..:.|||.|:|.
 Frog   259 QLV----LCKGGCQAIVDTGTSLITGPREEIRALHKAIGAFPLFSGE-YFVNCKRIQSLPTVSFI 318

  Fly   313 IGGTNFVLKPSAYI--IQSDGN--CMSAFEYMGTD-------FWILGDVFIGQYYTEFDLGNNRI 366
            :||..:.|....|:  |...|:  |:|.|  ||.|       .|||||||||||||.||..|:|:
 Frog   319 LGGVAYNLTGEQYVLKISKFGHTLCLSGF--MGLDIRPPAGPLWILGDVFIGQYYTVFDRDNDRV 381

  Fly   367 GFA 369
            |||
 Frog   382 GFA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 154/333 (46%)
napsaNP_001005701.1 A1_Propeptide 20..42 CDD:462326 4/21 (19%)
pepsin_retropepsin_like 61..384 CDD:472175 152/329 (46%)

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