DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and CG5863

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_650623.1 Gene:CG5863 / 42096 FlyBaseID:FBgn0038507 Length:395 Species:Drosophila melanogaster


Alignment Length:389 Identity:178/389 - (45%)
Similarity:250/389 - (64%) Gaps:17/389 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKTIAVVVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDE------E 59
            ::.::.::.|..|....:|.|:|:..:.:|:.:|:...|.:|.|..||.:...:.|..      |
  Fly     7 LWLSLWILCLFWAKCQGQLIRIPMQFQASFMASRRQHRAGRSSLLAKYNVVGGQEVTSRNGGATE 71

  Fly    60 QLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTC--KSDACLTHNQYDSSASSTYVAN 122
            .|.|.:|:.|.|.||||:|.|.|.:|||:||:||||||..|  ||.||..|::|::|||||:|.:
  Fly    72 TLDNRLNLEYAGPISIGSPGQPFNMLFDTGSANLWVPSAECSPKSVACHHHHRYNASASSTFVPD 136

  Fly   123 GESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDG 187
            |..|||.||||||:|.|:.|||.:..|.:|:|||..:|:|||..|.|.||.||:|:.:..:|..|
  Fly   137 GRRFSIAYGTGSLSGRLAQDTVAIGQLVVQNQTFGMATHEPGPTFVDTNFAGIVGLGFRPIAELG 201

  Fly   188 VAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQFTMA 252
            :.|.|.:|..|.|||..||||||.|:|:...||||:|||.|.:.:||:|||||::..|||||.:.
  Fly   202 IKPLFESMCDQQLVDECVFSFYLKRNGSERKGGELLFGGVDKTKFSGSLTYVPLTHAGYWQFPLD 266

  Fly   253 GSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILN---VGEDGY-LDCSSVSSLPDVTFNI 313
            ...:.|..:..:.||||||||||:.||...|:.::.:|.   ...:.| |:||.:.|||::.|.|
  Fly   267 VIEVAGTRINQNRQAIADTGTSLLAAPPREYLIINSLLGGLPTSNNEYLLNCSEIDSLPEIVFII 331

  Fly   314 GGTNFVLKPSAYIIQS---DGN--CMSAFEYMGTDFWILGDVFIGQYYTEFDLGNNRIGFAPVA 372
            ||..|.|:|..|::.:   ||:  |:|||..|..:||||||||||:|||.||.|..||||||.|
  Fly   332 GGQRFGLQPRDYVMSATNDDGSSICLSAFTLMDAEFWILGDVFIGRYYTAFDAGQRRIGFAPAA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 161/320 (50%)
CG5863NP_650623.1 Asp 80..394 CDD:394983 159/313 (51%)

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