DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and bace1

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_001428889.1 Gene:bace1 / 403005 ZFINID:ZDB-GENE-040426-1835 Length:522 Species:Danio rerio


Alignment Length:440 Identity:111/440 - (25%)
Similarity:179/440 - (40%) Gaps:87/440 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAV-VVLLAALASAELHRVPILKEQNFVKTRQNVLAEKS----YLRTKYQLPSLRSVDE-EQLSN 63
            :|| |..|.|.:...|.|||:  .|..:.......|.:|    .:|::.....:..::. :.|..
Zfish    12 VAVCVARLCASSGPALLRVPL--RQGPLTPHSTPAAHRSPHSPRVRSRRATSGISFINMIDNLRG 74

  Fly    64 SMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYDSSASSTYVANGESFSI 128
            .....||..:::|:|||...:|.|:||||..|.:    :.....|..|..|.||:|...|....:
Zfish    75 KSGQGYYIEMAVGSPAQRLNILVDTGSSNFAVGA----AAHPFLHRYYHRSLSSSYRDLGRGVYV 135

  Fly   129 QYGTGSLTGYLSTDTVDV---NGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLA-VDGVA 189
            .|..|...|.|.||.|.|   ..:|::: ..|..|.......|.:|::||||:||..:| .|...
Zfish   136 PYTQGRWEGELGTDVVSVPCGPNVSLRA-NIAAITQSDRFFINGSNWEGILGLAYAEIARPDETL 199

  Fly   190 PPFYNMVSQGLVDNSVFSFYLARDG---------TSTMGGELIFGGSDASLYSGALTYVPISEQG 245
            .||::.:.:......|||..|...|         :||:||.:|.||.|.|||.|.|.|.||..:.
Zfish   200 EPFFDSLLRQSTVADVFSLQLCGAGYSHNYSTGSSSTVGGSMIIGGVDPSLYVGELWYTPIRREW 264

  Fly   246 YWQFTMAGSSIDGYSLCDDC------QAIADTGTSLIVAPYNAYITLSEILNVGEDGYLD----- 299
            |::..:....::|..|..||      ::|.|:||:.:..|...:....:.:......|.:     
Zfish   265 YYEVIIVRIEVNGQDLNMDCKEYNYDKSIVDSGTTNLRLPRKVFQAAVKAIEAASSVYSEYSCAH 329

  Fly   300 -----CSSVSSLPD--------VTFNIGGTNFVLKP--SAYIIQSDGNCMSAF-------EYM-- 340
                 |......|.        |.:..|.|.:.:.|  |.|::..:.|  .:|       :|:  
Zfish   330 SDSAWCPQTEQFPSGFWLGEQLVCWQAGTTPWHIFPVISLYLMSENRN--QSFRISILPQQYLRP 392

  Fly   341 ---------------------GTDFWILGDVFIGQYYTEFDLGNNRIGFA 369
                                 ||   ::|.|.:..:|..|:..:.|||||
Zfish   393 VEDVASAQEDCYKFAVSQSSTGT---VMGAVIMEGFYVVFERQHKRIGFA 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 96/378 (25%)
bace1NP_001428889.1 None

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