DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-15

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_741675.1 Gene:asp-15 / 189740 WormBaseID:WBGene00012681 Length:390 Species:Caenorhabditis elegans


Alignment Length:333 Identity:116/333 - (34%)
Similarity:176/333 - (52%) Gaps:29/333 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDAC-------LTHNQYDSSASST 118
            |::.|:..|...|::|||.||..|:..:||:|.||....|.|.||       .|..::.|:.||:
 Worm    57 LADYMDEIYTANITVGTPPQSASVVMGTGSANFWVVGAGCTSPACNGFPDSGHTKLKFYSNKSSS 121

  Fly   119 YVANGESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESL 183
            :|.....|.|.|.||:.:|||.||.:.:.||::::|.||.:| :..........||:||:|:..:
 Worm   122 FVDLNRKFFINYPTGACSGYLGTDVLQLGGLTVKNQEFAVTT-QISDQMGHFPLDGVLGLAWPPV 185

  Fly   184 AVDGVAPPFYNMVSQGLVDNSVFSFYLAR-----DGTSTMGGELIFGGSDASLYSGALTYVPISE 243
            |||.:.||..|::.|  :|..:|:.:|.|     .|.|  ||.:.||..|.......:.||.:|.
 Worm   186 AVDQITPPMQNLMPQ--LDAPIFTLWLDRVLQGSQGGS--GGLITFGAIDTKNCDAQVNYVALSS 246

  Fly   244 QGYWQFTMAGSSIDGYSLCDDCQAIADT---GTSLIVAPYNAYITLSEILN--VGEDGYLDCSSV 303
            :.:|||.:.|.:|..|:.....|||:|:   |..|.:|..||.|..::...  ..|...||||::
 Worm   247 KTFWQFPLDGVAIGSYTSMKKDQAISDSGDFGLRLPLAVLNAVIQQTKATYDWTNEFYTLDCSTM 311

  Fly   304 SSLPDVTFNIGGTNFVLKPSAYIIQ---SDGNCMSA-FEYMGTDF---WILGDVFIGQYYTEFDL 361
            .:.||:.|.|||..:.:|...||:.   .:|.|:.| |....|.|   :..|:||:.||...||:
 Worm   312 QTQPDLVFTIGGMQYPVKSVEYILDLGLGNGRCVLAMFTDSSTGFGPSFGFGNVFLRQYCNIFDV 376

  Fly   362 GNNRIGFA 369
            ||.|||||
 Worm   377 GNARIGFA 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 114/331 (34%)
asp-15NP_741675.1 pepsin_retropepsin_like 65..384 CDD:472175 112/323 (35%)

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