DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-1

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_741677.1 Gene:asp-1 / 180251 WormBaseID:WBGene00000214 Length:396 Species:Caenorhabditis elegans


Alignment Length:393 Identity:140/393 - (35%)
Similarity:209/393 - (53%) Gaps:38/393 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VVVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRTKYQLPSLRSVDEEQLSNS------- 64
            |::.|.|..||.:.:||..|.::.   |..::.|..|  |.: |.|..:...:||:..       
 Worm     5 VLLALVAACSAAVIQVPTHKTESL---RAKLIKEGKY--TAF-LASQHAARAQQLNTGFQPFVDY 63

  Fly    65 MNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDAC-------LTHNQYDSSASSTYVAN 122
            .:..|.|.|::|||.|...|:.|:|||||||....||:.||       .|..::|::.|:|:|..
 Worm    64 FDDFYLGNITLGTPPQPATVVLDTGSSNLWVIDAACKTQACNGYPDSGYTKQKFDTTKSTTFVKE 128

  Fly   123 GESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVDG 187
            ...||||||:||..|||..|.::..||::|||.|..||:.... |.....|||||:.:.:||||.
 Worm   129 TRKFSIQYGSGSCNGYLGKDVLNFGGLTVQSQEFGVSTHLADV-FGYQPVDGILGLGWPALAVDQ 192

  Fly   188 VAPPFYNMVSQGLVDNSVFSFYLARD---GTSTMGGELIFGGSDASLYSGALTYVPISEQGYWQF 249
            |.||..|:::|..:|..:|:.:|.|:   ...|.||.:.:|..|....:..:||||:|.:.||||
 Worm   193 VVPPMQNLIAQKQLDAPLFTVWLDRNLQIAQGTPGGLITYGAIDTVNCAKQVTYVPLSAKTYWQF 257

  Fly   250 TMAGSSIDGYSLCDDCQAIADTGTSLIVAPYNAYIT-----LSEILNVGEDGY-LDCSSVSSLPD 308
            .:...::..||.....|.|:|||||.:.|| |..::     ...:.:...:.| :|||::.:.||
 Worm   258 PLDAFAVGTYSETKKDQVISDTGTSWLGAP-NTIVSAIVKQTKAVFDWSTELYTVDCSTMKTQPD 321

  Fly   309 VTFNIGGTNFVLKPSAYIIQ---SDGNCMSAFEYMGT----DFWILGDVFIGQYYTEFDLGNNRI 366
            :.|.|||..|.:|...|::.   ..|.|..|...||:    ..|||||.||.||...:|:||.:|
 Worm   322 LIFTIGGAQFPVKSVEYVLDLQLGGGKCALAVFSMGSGGFGPSWILGDTFIRQYCNVYDIGNGQI 386

  Fly   367 GFA 369
            |||
 Worm   387 GFA 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 124/339 (37%)
asp-1NP_741677.1 Asp 67..391 CDD:394983 124/325 (38%)

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