DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-17

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_741673.1 Gene:asp-17 / 180250 WormBaseID:WBGene00012683 Length:391 Species:Caenorhabditis elegans


Alignment Length:399 Identity:138/399 - (34%)
Similarity:203/399 - (50%) Gaps:56/399 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VVLLAALASAELHRVPILKEQNFVKTRQNVLAEKSYLRT-KYQ-------LPSLRSVDEEQLSNS 64
            ::.||...||.:.::|         |:.........:|. |||       ...|.:: .:.:|:.
 Worm     6 LLFLAPFCSAAVFQLP---------TKSTGSLRAKLIRAGKYQEFLITQHAARLNTI-SQPISDY 60

  Fly    65 MNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDAC-------LTHNQYDSSASSTYVAN 122
            .:..|.|..::|||.|...::.|:||:|:||...:|.:..|       .|..::|:|.||::...
 Worm    61 SDEVYLGNFTVGTPPQPVSLVLDTGSANMWVIDASCDNMFCNGWIGSNYTRQKFDTSKSSSFSRE 125

  Fly   123 GESFSIQYGTGSLTGYLSTDTVDV-NGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYESLAVD 186
            ...||||||.|..:|||.||||.: .||:|:.|... ..|:...:|.....|||.|:|:.:||||
 Worm   126 NRKFSIQYGKGLCSGYLGTDTVGLGGGLTIRKQELG-IANKLDVDFAVQPMDGIFGLAWPALAVD 189

  Fly   187 GVAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGE---LIFGGSDASLYSGALTYVPISEQGYWQ 248
            .:.||..|::||  :|..|||.:|.|...::.||.   :.:||.|.......:||||::.:.|||
 Worm   190 QITPPMQNLISQ--LDVPVFSVWLDRKIQASHGGSAGMITYGGIDTKNCDAGVTYVPLTAKTYWQ 252

  Fly   249 FTMAGSSIDGYSLCDDCQAIADTGTSLIVAPY---NAYIT--------LSEILNVGEDGYLDCSS 302
            |.|.|.::..||.....|.|:|||:|.|.|||   |...|        ::||..|      .||:
 Worm   253 FKMDGFAVGTYSQYGYNQVISDTGSSWISAPYAMINDIATQTHATWDEMNEIYTV------KCST 311

  Fly   303 VSSLPDVTFNIGGTNFVLKPSAYIIQ---SDGNCMSAFE-YMGTDF---WILGDVFIGQYYTEFD 360
            :.:.||:.|.|||..|.:|...||:.   .:|.|..|.. .|.:.|   ||||||||.||...:|
 Worm   312 MKTQPDLVFTIGGALFPVKSVEYILDIGLDEGKCALAISPLMASGFGPSWILGDVFIRQYCNIYD 376

  Fly   361 LGNNRIGFA 369
            :||.|||||
 Worm   377 IGNARIGFA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 125/338 (37%)
asp-17NP_741673.1 pepsin_retropepsin_like 65..387 CDD:472175 126/330 (38%)

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