DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and asp-13

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_505232.1 Gene:asp-13 / 179247 WormBaseID:WBGene00017881 Length:389 Species:Caenorhabditis elegans


Alignment Length:398 Identity:115/398 - (28%)
Similarity:192/398 - (48%) Gaps:51/398 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAALASAEL--HRVPILKEQNFVKTRQNVLAE-KSYLRTKYQLPSLRSVDEEQLSNSMN 66
            |:::.||...::|.:  |:: |.||...::..:|  .| .:||..:         |....|.|.|
 Worm     4 ISIIFLLIGSSTAAVLEHQL-IWKESRMIEMIRN--GEYPAYLEYR---------DRMVASRSSN 56

  Fly    67 MA-------------YYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYDSSASST 118
            :|             |.|.|::|||.|:|.|:.|:||:||.:|...| :..|.....::..||||
 Worm    57 LATVVQSTTDYVYYEYMGNITVGTPDQNFIVVLDTGSANLLIPGTNC-TTYCEKKRLFNEKASST 120

  Fly   119 YVANGESFSIQYGTGSLTGYLSTDTVDVNG-----LSIQSQTFAESTNEPGTNFNDANFDGILGM 178
            |:|....:.|:|.:|...|.|..|||.:.|     |:| .:::....:..|::|..:..:||.|:
 Worm   121 YIATNRPWQIKYASGDAYGTLGIDTVKIGGSGEAQLAI-PRSYLGVADTVGSDFKWSPKEGIFGL 184

  Fly   179 AYESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGT--STMGGELIFGGSDASLYSGALTYVPI 241
            |:.:||||.:.||..|.::|||:|..:|:.:..:.|.  ::..|...:||.|.:.....:.|..:
 Worm   185 AFTALAVDNITPPIINAINQGLLDQPLFTTWFGQRGAPGTSASGAFTYGGLDKNHCGPVIGYAEL 249

  Fly   242 SEQGYWQFTMAGSSIDGYSLCDDCQAIADTGTSLIVAPYNAYITLSEILNVGEDGYLDCSSVSSL 306
            :...::||...|.|:..|......:.|.||.||.:..|..|...|::......|   ..:.|.::
 Worm   250 TNARHFQFQATGFSLGSYVSTTTYEVITDTATSFLCGPQAAIDNLAKAAGATWD---PTNQVFNI 311

  Fly   307 P------DVTFNIGGTNFVLKPSAYIIQSDGN-CMSAF---EYMG-TDFWILGDVFIGQYYTEFD 360
            |      .:...||..|:|::.:.||::.|.| |:.|.   .|.| ...||||..|:.||....|
 Worm   312 PCDADAGPIKMKIGQFNYVIRANNYILKIDTNSCLFAAIPQNYAGFGPSWILGGPFMRQYCNVHD 376

  Fly   361 LGNNRIGF 368
            :|..|:||
 Worm   377 IGQKRVGF 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 102/341 (30%)
asp-13NP_505232.1 pepsin_retropepsin_like 71..384 CDD:472175 96/317 (30%)

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