DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bace and Napsa

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:NP_032463.1 Gene:Napsa / 16541 MGIID:109365 Length:419 Species:Mus musculus


Alignment Length:400 Identity:162/400 - (40%)
Similarity:214/400 - (53%) Gaps:55/400 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IAVVVLLAAL--ASAELHRVPILK--------------EQNFVKTRQNVLAEKSYLRTKYQLPSL 53
            :.:.:||..|  ..|:|.|||:.:              ||         |||.|...|....||.
Mouse     7 LLLCLLLGNLEPEEAKLIRVPLQRIHLGHRILNPLNGWEQ---------LAELSRTSTSGGNPSF 62

  Fly    54 RSVDEEQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCK--SDACLTHNQYDSSAS 116
                 ..||..||..|:|.|.:|||.|:|.|:||:|||||||||..|.  |.||..|::::..||
Mouse    63 -----VPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKAS 122

  Fly   117 STYVANGESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAYE 181
            |::..||..|:||||||.|:|.||.|.:.:.|:.....||.|:..||...|..|:||||||:.:.
Mouse   123 SSFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFP 187

  Fly   182 SLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQGY 246
            :|||.||.||...||.|||::..||||||.||...:.||||:.||||.:.|...||::|::...|
Mouse   188 TLAVGGVQPPLDAMVEQGLLEKPVFSFYLNRDSEGSDGGELVLGGSDPAHYVPPLTFIPVTIPAY 252

  Fly   247 WQFTMAGSSI-DGYSLC-DDCQAIADTGTSLIVAPYNAYITLSEILNVGEDGY--------LDCS 301
            ||..|....: .|.||| ..|.||.|||||||..|......|::.:.    ||        :.||
Mouse   253 WQVHMESVKVGTGLSLCAQGCSAILDTGTSLITGPSEEIRALNKAIG----GYPFLNGQYFIQCS 313

  Fly   302 SVSSLPDVTFNIGGTNFVLKPSAYII---QSD-GNCMSAFEYM-----GTDFWILGDVFIGQYYT 357
            ...:||.|:|::||..|.|....|:|   ||| |.|:..|:.:     ....|||||||:|.|..
Mouse   314 KTPTLPPVSFHLGGVWFNLTGQDYVIKILQSDVGLCLLGFQALDIPKPAGPLWILGDVFLGPYVA 378

  Fly   358 EFDLGNNRIG 367
            .||.|:..:|
Mouse   379 VFDRGDKNVG 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 144/329 (44%)
NapsaNP_032463.1 pepsin_retropepsin_like 68..394 CDD:472175 142/324 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..419
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.