DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bace and LOC100493461

DIOPT Version :10

Sequence 1:NP_609235.1 Gene:Bace / 34182 FlyBaseID:FBgn0032049 Length:372 Species:Drosophila melanogaster
Sequence 2:XP_002938556.2 Gene:LOC100493461 / 100493461 XenbaseID:XB-GENE-29081723 Length:402 Species:Xenopus tropicalis


Alignment Length:401 Identity:169/401 - (42%)
Similarity:229/401 - (57%) Gaps:40/401 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KTIAVVVLLAALASAELHRVPILK------------EQN--FVKTRQNVLAEKSYLR---TKYQL 50
            |.:.::|....||: .|.|||::|            |.|  ::..:.::.|.| |.:   ..|.|
 Frog     2 KVLLILVGCIQLAT-PLERVPLVKFKSIRSHLWQRDELNEFWLHHQPHIFARK-YTQCFPPPYSL 64

  Fly    51 PSLRSVDEEQLSNSMNMAYYGAISIGTPAQSFKVLFDSGSSNLWVPSNTCKSDACLTHNQYDSSA 115
            .:  ....|.|.:.||..|||.||:|||.|:|.|:||:||||.||||:.|.|:||..|.::.|..
 Frog    65 AA--GTTTEYLVDYMNAQYYGEISVGTPPQNFSVVFDTGSSNFWVPSSYCLSEACQVHERFKSFE 127

  Fly   116 SSTYVANGESFSIQYGTGSLTGYLSTDTVDVNGLSIQSQTFAESTNEPGTNFNDANFDGILGMAY 180
            |::|...|..|||.||||.|.|....||:.::.:||:.|.|.||..|||..|..|.|||:||:.|
 Frog   128 STSYEHGGRPFSIHYGTGQLVGVTGRDTLRISNMSIEGQDFGESILEPGRTFVLAQFDGVLGLGY 192

  Fly   181 ESLAVDGVAPPFYNMVSQGLVDNSVFSFYLARDGTSTMGGELIFGGSDASLYSGALTYVPISEQG 245
            .||||.|..|.|..:|:|.||:..:|||:|.||..|..||||||||.|.|||.|.:.::|::|:|
 Frog   193 PSLAVAGAVPVFDRIVNQKLVEQQLFSFHLNRDYDSEYGGELIFGGIDHSLYKGQIHWIPLTEKG 257

  Fly   246 YWQFTMAGSSIDGYSL-C-DDCQAIADTGTSLIVAPYNAYITLSEILNV-----GEDGY-LDCSS 302
            |||..:....:||.:: | ..||.|.|:|||||..|......|.|:|..     ||  | ||||.
 Frog   258 YWQIRLDNVKVDGEAMFCQSSCQVIVDSGTSLITGPKAEIKKLQELLGATPTLFGE--YILDCSR 320

  Fly   303 VSSLPDVTFNIGGTNFVLKPSAYII----QSDGNCMSAFEYMGTD-----FWILGDVFIGQYYTE 358
            |||||.|||.||..::.|.|..|.|    |....|::.|:.|...     .|||||:|:.::|:.
 Frog   321 VSSLPRVTFTIGQRDYTLTPEQYTIKERSQKSDFCLTGFQAMDISTKDGPLWILGDIFMSKFYSV 385

  Fly   359 FDLGNNRIGFA 369
            ||..::|||.|
 Frog   386 FDREHDRIGLA 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BaceNP_609235.1 pepsin_retropepsin_like 59..369 CDD:472175 152/326 (47%)
LOC100493461XP_002938556.2 A1_Propeptide 19..45 CDD:462326 6/25 (24%)
pepsin_retropepsin_like 75..397 CDD:472175 151/324 (47%)

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