DRSC/TRiP Functional Genomics Resources

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Protein Alignment SLC5A11 and smvt-1

DIOPT Version :10

Sequence 1:NP_609192.1 Gene:SLC5A11 / 34117 FlyBaseID:FBgn0031998 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001360058.2 Gene:smvt-1 / 186132 WormBaseID:WBGene00018716 Length:565 Species:Caenorhabditis elegans


Alignment Length:601 Identity:170/601 - (28%)
Similarity:293/601 - (48%) Gaps:71/601 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DYAVFLGMIVLSTSTGIYFGCIKKSKVKLEEAEPTLPTTTPKRRKHDFGSEKMSEYLLGSRNLKV 82
            ||...|..::..::    :|.||..|.:.||                   :.:...::||| :.|
 Worm     5 DYVTLLTCLISISA----YGFIKSRKTENEE-------------------QSVHATMVGSR-VSV 45

  Fly    83 FPVAMSLIASYISGVTILGTTSEI-YNYGTQYWFIAIAIMLQGIAVSYVYIPVFSALQVGSSYEY 146
            :...:|:.:.:||.:::||..:|| |..|...||..:.::...| |::|::||...|::.:.|||
 Worm    46 WSATLSVCSGFISSISLLGFPAEIYYQGGMMLWFAPMYVISFPI-VAFVFLPVLYRLKLTTIYEY 109

  Fly   147 LEMRFHSVVRSIASFMFILDEILFLPFIVYVPAIALNQVSGINLHVIAVVIVVVCVFYTFVGGIK 211
            .|.||....|.:.:.:|.:..||:....:|.|::|:..::.|.:.|..::..|:..||..|||:|
 Worm   110 FERRFDYKCRFVTTSLFCVQMILYNSVALYAPSLAIASITNIPITVSILITAVLSAFYISVGGVK 174

  Fly   212 AVVHTDAWQVLVMFLSVLAVAILATVYANGLNVLFDDAAKGGRLIFNNTNPSPYVRHTVWSVLIG 276
            |.:||.|.|:|::||::..: |..::....::.::.....|.|.|.|:...:|.:||:|||:|||
 Worm   175 AGIHTSAIQMLLIFLTMTFI-ISISLREMSIHDVYTSVVHGKRFILNDFRINPTIRHSVWSLLIG 238

  Fly   277 GFSYWTSFNAVNQTMVQRYMSLPSLKKAR----ASMAIFTIGVAAFVSVCCYVGLLIYEMYKDCD 337
            |.....:..|.||..:||||::.:||.|:    .::...||.:.::||    ||.|||..||||.
 Worm   239 GTGNILALFAANQLSIQRYMAMDTLKSAQKVVLLNIVCNTIILVSYVS----VGFLIYAHYKDCH 299

  Fly   338 PLSAGLITHDDQLLPLFVVQSVGHIYGMSGLFIAGIFGAALSSLSVVLNSTSLVILED---IVRG 399
            |    .|.:.::|||.||:.......|..|||.|.::.|.:|:||....:.|.:::.|   :.|.
 Worm   300 P----QIGNANELLPRFVMDVTSKYPGSVGLFAAAVYSAGISTLSASFTAVSSIVINDVWKVYRE 360

  Fly   400 CFKMQP-----SERASTILVKSTVIVLGFVALSLVFVLEQL-SGILSICTSMTAIAAGTTFGLFT 458
            ..||.|     .:.|..||    .|||.|:::.:.|:...| |.||.:...:.....|...|.|.
 Worm   361 RRKMAPLRNDQVQNAMRIL----PIVLSFISIFVAFLCSMLQSIILQVSFIVFGAGGGPVLGSFV 421

  Fly   459 LGMLVPWANTVGTAVGGIASALLAGWISFGT------QFTIAAGELNSQKLPVSVEGCVGNVTLR 517
            :|:.||........||.|.|.::...||.|:      ...:..|:.::|.|....|..:|.||..
 Worm   422 VGLFVPRVKEKAALVGLIGSIIVCFSISIGSVLVKVKPVALELGQCSNQTLTYFDESFIGAVTST 486

  Fly   518 ENIWVDEEQVFPLYRLSYHWINPIGVAT----VIVVGALVSLVTKPTNMKTLDPDLISPVIHRFL 578
            ..::..|.    ::.:||.:.:.|.|.|    .||:..|..|.:...|...:..:|:||::    
 Worm   487 PLVFGLER----IFAISYQYYSIIAVVTNVALSIVMQKLFELCSLTANHLPVSHELVSPLL---- 543

  Fly   579 PKECFSGRNLHAQAHK 594
             ....|.|:...:||:
 Worm   544 -TYSSSKRDPELEAHR 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC5A11NP_609192.1 SLC5sbd_NIS-SMVT 17..556 CDD:271383 161/561 (29%)
smvt-1NP_001360058.2 SLC5sbd_NIS-SMVT 5..521 CDD:271383 160/557 (29%)

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