DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Acbp1 and acbp-3

Sequence 1:NP_001285744.1 Gene:Acbp1 FlyBaseID:FBgn0031992 Length:90 Species:Drosophila melanogaster
Sequence 2:NP_509822.2 Gene:acbp-3 WormBaseID:WBGene00009818 Length:116 Species:Caenorhabditis elegans

Alignment Length:86 Identity:32/87 (37%)
Similarity:50/87 (57%) Gaps:7/87 (8%)


  Fly     1 MSELQEFNQAAEDVKNLNTT----PGDNDLLELYSLYKQATVGDCNTDKPGFLDFKGKAKWEAWN 61
            ||..::|:.|.|.::.|..|    ..::..|..|||:|||::||.|||:||......:.||::|.
 Worm     1 MSLQEKFDAAVEIIQKLPKTGPVATSNDQKLTFYSLFKQASIGDVNTDRPGIFSIIERKKWDSWK 65

  Fly    62 NRKGMSNTDAQAAYITKVKAL 82
            ..:|:|..:|:..||   |||
 Worm    66 ELEGVSQDEAKERYI---KAL 83

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Acbp1NP_001285744.1 ACBP 5..87 CDD:238248 30/83 (36%)
acbp-3NP_509822.2 ACBP 3..91 CDD:238248 30/85 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG4281
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 OOG5_127366
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 1 0.960
32.760

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