DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and pib2

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_595745.1 Gene:pib2 / 2540208 PomBaseID:SPBC9B6.03 Length:293 Species:Schizosaccharomyces pombe


Alignment Length:170 Identity:45/170 - (26%)
Similarity:70/170 - (41%) Gaps:53/170 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SPAGSSSSAAGKNPNGNGDRNGPSNARSRLNVFNYMAR-QQPGAECSHFEYFQSIR-NPRLER-Y 142
            |.:||.:|::...|...|..  ||:...:|  ::.:.| ::|       |.|:|.. ||||.: |
pombe    49 SVSGSPNSSSNSTPANQGSL--PSHTNPQL--YSSITRKERP-------ELFRSYSGNPRLSKPY 102

  Fly   143 AS----------------------ETNKLIIRLHRLLKDLPADSVQRRQHEQQTVA---WLDGSS 182
            ||                      .||..:           |.|:..:...:..::   |...|.
pombe   103 ASSKLAASSRTASYQAMSYSVSPTSTNSSV-----------ATSLNYQSSRETGISKDHWKPDSD 156

  Fly   183 VKLC--PSCAKSFHIARRQHHCRLCGGIMCN-DCSKFLPL 219
            |.:|  |||:..|.:..|:||||.||.|.|. .|.:.:||
pombe   157 VSVCSFPSCSVRFGLFDRRHHCRRCGDIFCALHCDRNIPL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 20/52 (38%)
Rbsn 452..490 CDD:463283
pib2NP_595745.1 FYVE_scVPS27p_Vac1p_like 159..216 CDD:277275 17/38 (45%)
Blue background indicates that the domain is not in the aligned region.

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