DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and FGD1

DIOPT Version :10

Sequence 1:NP_609186.1 Gene:Rbsn-5 / 34110 FlyBaseID:FBgn0261064 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_004454.2 Gene:FGD1 / 2245 HGNCID:3663 Length:961 Species:Homo sapiens


Alignment Length:354 Identity:71/354 - (20%)
Similarity:126/354 - (35%) Gaps:113/354 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 EYFQSIRNPRLERYAS-ETNKLIIRLHRLLKDLPADS----------VQRRQHEQQTVAWLDGSS 182
            ::.|:|.:..|:...: ||.||:...:|..:|.|.:|          ...|:.|           
Human   679 DWVQAINSTLLKHEQTLETFKLLNSTNREDEDTPPNSPNVDLGKRAPTPIREKE----------- 732

  Fly   183 VKLCPSCAKSFH-IARRQHHCRLCGGIMCNDCSKFLPLEDAMQLASLSTTRSEPLQQLHQHENAI 246
            |.:|..|.:.|: |.:|:|||:.||.::|..||:|                  ..:.::.:..:.
Human   733 VTMCMRCQEPFNSITKRRHHCKACGHVVCGKCSEF------------------RARLVYDNNRSN 779

  Fly   247 RLCEHCLWLLDTRKDMH----ESRTCRPLLVQVYEQIRQLQKEVTPDLDMYLKIINSLNEGDTIF 307
            |:|..|...|      |    .|..|.....|....|.:.|..|..:..:....::.:.:|    
Human   780 RVCTDCYVAL------HGVPGSSPACSQHTPQRRRSILEKQASVAAENSVICSFLHYMEKG---- 834

  Fly   308 TLADAGALRGKIGQVA-EAMDMRSKRILAIFCEPGSREEALKKAIRLGCIQAIK-ERMLSL---- 366
                     ||....| ..:......:|.|:                |..|.:| :|.|.|    
Human   835 ---------GKGWHKAWFVVPENEPLVLYIY----------------GAPQDVKAQRSLPLIGFE 874

  Fly   367 --PP----LPEESHIRQMQERR-----RMETEQRILTEQRMAMEAYERNNMAANQSNVGVPGPES 420
              ||    .|:..|:.::.:..     ..|||:.    ||..|....|    |.:.:...|||  
Human   875 VGPPEAGERPDRRHVFKITQSHLSWYFSPETEEL----QRRWMAVLGR----AGRGDTFCPGP-- 929

  Fly   421 GSFAQGSDLQSLNNWSAPQAASKSSLDDP 449
             :.::..:::     .||.||..::.:.|
Human   930 -TLSEDREME-----EAPVAALGATAEPP 952

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rbsn-5NP_609186.1 FYVE_RBNS5 174..259 CDD:277256 19/85 (22%)
Rbsn 452..490 CDD:463283
FGD1NP_004454.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..353
PHA03247 <50..332 CDD:223021
SH3-binding. /evidence=ECO:0000255 171..187
RhoGEF 376..559 CDD:238091
PH1_FGD1 591..698 CDD:275392 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 702..726 4/23 (17%)
FYVE_FGD1_2_4 725..789 CDD:277280 20/92 (22%)
PH2_FGD1-4 815..920 CDD:270056 24/141 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 925..961 8/36 (22%)
Blue background indicates that the domain is not in the aligned region.

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