DRSC - DRSC Integrative Ortholog Prediction Tool

DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rbsn-5 and fgd1

DIOPT Version :10

Sequence 1:	NP_609186.1	Gene:	Rbsn-5 / 34110	FlyBaseID:	FBgn0261064	Length:	505	Species:	Drosophila melanogaster
Sequence 2:	XP_004914246.1	Gene:	fgd1 / 100489369	XenbaseID:	XB-GENE-6453246	Length:	913	Species:	Xenopus tropicalis

Alignment Length:	35	Identity:	15/35 - (42%)
Similarity:	24/35 - (68%)	Gaps:	1/35 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly   183 VKLCPSCAKSFH-IARRQHHCRLCGGIMCNDCSKF 216
            |.:|..|.:.|: |.:|:|||:.||.::|..||:|
Frog   699 VTMCMKCQEPFNSITKRRHHCKACGHVVCGKCSEF 733

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rbsn-5	NP_609186.1	FYVE_RBNS5	174..259	CDD:277256	15/35 (43%)
Rbsn-5	NP_609186.1	Rbsn	452..490	CDD:463283
fgd1	XP_004914246.1	PHA03247	<6..207	CDD:223021
		PspC_subgroup_2	<54..>122	CDD:468202
		RhoGEF	341..525	CDD:238091
		PH1_FGD1	557..664	CDD:275392
		FYVE_FGD1_2_4	691..755	CDD:277280	15/35 (43%)
		PH2_FGD1-4	780..885	CDD:270056
Blue background indicates that the domain is not in the aligned region.

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