DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and Rdh14

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001102746.1 Gene:Rdh14 / 500629 RGDID:1565196 Length:334 Species:Rattus norvegicus


Alignment Length:301 Identity:114/301 - (37%)
Similarity:168/301 - (55%) Gaps:25/301 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQE--------RPAARSR 175
            :||:|.||||||.|:|..||..|...|..:|..||:|:.||.|..::.||        ..|...:
  Rat    42 MHGKTVLITGANSGLGRATAGELLRLGARVIMGCRDRARAEEAAGQLRQELGQAGGLGPDATDGQ 106

  Fly   176 CRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFYLTL 240
            .....|||:|||||:.|.:|:.|....:|.||.|||||..|||:|.||.|..|.|:||.||.||.
  Rat   107 LVVKELDLASLRSVRAFCQELLQEEPRLDVLINNAGVFQCPYTKTEDGFEMQFGVNHLGHFLLTN 171

  Fly   241 QLETLF--DYKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQELA 303
            .|..|.  ...:||:|:||:.:::.::..|:|      ...:.|.....|:.:||.|:||.:|||
  Rat   172 LLLGLLKSSAPSRIVVVSSKLYKYGDINFEDL------NSEQSYNKSFCYSRSKLANILFTRELA 230

  Fly   304 QRWKQRGISVFSLHPGNMVSSDLSRNY---WFYRLLFAIVR-PFTKSLQQAAATSIYCATANELT 364
            .|.:...::|..|||| :|.::|.|:.   ...|.||.:|. .|.|:..:.|.||||.|::.::.
  Rat   231 HRLEGTNVTVNVLHPG-IVRTNLGRHIHIPLLARPLFNLVSWAFFKTPLEGAQTSIYLASSPDVE 294

  Fly   365 GLSGLYFNNCFFCE--PSKLSKSAALQQQLWKLSENLIAEL 403
            |:||.||.:|...|  |..:.:|.|  ::||.:||.::..|
  Rat   295 GVSGRYFGDCKEEELLPKAMDESVA--RKLWDISEVMVGIL 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 112/296 (38%)
Rdh14NP_001102746.1 Rossmann-fold NAD(P)(+)-binding proteins 44..326 CDD:473865 110/290 (38%)
Blue background indicates that the domain is not in the aligned region.

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