DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and Rdh11

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_067532.2 Gene:Rdh11 / 17252 MGIID:102581 Length:316 Species:Mus musculus


Alignment Length:312 Identity:112/312 - (35%)
Similarity:170/312 - (54%) Gaps:31/312 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 QVRQRFDS--CSTALQVLHGKDLHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAA 161
            ::|:...|  |::.:|      |.|:.|::||||.|||.|||:.||..|..:..|||:....|.|
Mouse    20 KIRKMLSSGVCTSNVQ------LPGKVAIVTGANTGIGKETAKDLAQRGARVYLACRDVDKGELA 78

  Fly   162 IERIAQERPAARSRCRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLET 226
            ...|  :.....|:.....|||:..:|::.|.::......|:..||.||||...||::|.||.|.
Mouse    79 AREI--QAVTGNSQVFVRKLDLADTKSIRAFAKDFLAEEKHLHLLINNAGVMMCPYSKTADGFEM 141

  Fly   227 TFQVSHLSHFYLT-LQLETLFD-YKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSM-MAY 288
            ...|:||.||.|| |.||.|.: ..:||:.|||..|....:...||       ..||::|. :||
Mouse   142 HIGVNHLGHFLLTHLLLEKLKESAPSRIVNLSSLGHHLGRIHFHNL-------QGEKFYSAGLAY 199

  Fly   289 NNAKLCNVLFAQELAQRWKQRGISVFSLHPGNMVSSDLSRNY-----WFYRLLFAIVRPFTKSLQ 348
            .::||.|:||.:|||:|.|..|::.:|:|||. |.|:|:| |     |.::|.|.    |.|:.|
Mouse   200 CHSKLANILFTKELAKRLKGSGVTTYSVHPGT-VHSELTR-YSSIMRWLWQLFFV----FIKTPQ 258

  Fly   349 QAAATSIYCATANELTGLSGLYFNNCFFCEPSKLSKSAALQQQLWKLSENLI 400
            :.|.||:|||....|..|||.:|::|.....|...::..:.::||.:|.:|:
Mouse   259 EGAQTSLYCALTEGLESLSGSHFSDCQLAWVSYQGRNEIIARRLWDVSCDLL 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 107/288 (37%)
Rdh11NP_067532.2 Rossmann-fold NAD(P)(+)-binding proteins 38..306 CDD:473865 105/282 (37%)
Blue background indicates that the domain is not in the aligned region.

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