DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wwox and dhrs12lb

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_002660947.4 Gene:dhrs12lb / 100334077 ZFINID:ZDB-GENE-131121-6 Length:325 Species:Danio rerio


Alignment Length:285 Identity:87/285 - (30%)
Similarity:132/285 - (46%) Gaps:32/285 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 RQRFDSCSTALQVLHGKDLH----GRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAA 161
            |..|::.|.:..   .|||.    ||:.:|||||.|||..||.::|..|..:...|||:..||.|
Zfish    19 RSGFENASKSFA---AKDLDVSMVGRSFMITGANSGIGKATAMTIAKKGGTVHIVCRNKEKAERA 80

  Fly   162 IERIAQERPAARSRCRFA-ALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLE 225
            .|.|..   |:.:...|. .||||..|.|..|.|..|:..:.::.||.|||..........||||
Zfish    81 REEIVS---ASGNTMVFVHVLDLSESRKVWEFAEAFKKEHTSLNVLINNAGCMVNQREINSDGLE 142

  Fly   226 TTFQVSHLSHFYLTLQLETLFDYK--TRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAY 288
            ..|..:.|..:.||..|..|.:..  .|:|.:||     ..:.|:.|....|.....::.:.|.|
Zfish   143 KNFATNTLGVYILTKCLIPLLEKSRDPRVITVSS-----GGMLVQKLNPDDLQTERAQFDATMVY 202

  Fly   289 NNAKLCNVLFAQELAQRWKQRGISVFSLHPG----NMVSSDLSRNYWFYRLLFAIVRPFTKSLQQ 349
            ...|...|:..:..|:.:.:...||  :|||    ..|:|.:.:   ||:|:    |...:|.:|
Zfish   203 AQNKRQQVVMTEFWAKAYPKIHFSV--MHPGWADTPAVASAMPQ---FYQLM----RDRLRSAEQ 258

  Fly   350 AAATSIYCATAN-ELTGLSGLYFNN 373
            ::.|.|:.|.:. .:|..|||:|.:
Zfish   259 SSDTLIWLAMSRVTITFPSGLFFQD 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 81/261 (31%)
dhrs12lbXP_002660947.4 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.