DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and ntn5

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_001072385.1 Gene:ntn5 / 779839 XenbaseID:XB-GENE-22063027 Length:601 Species:Xenopus tropicalis


Alignment Length:468 Identity:145/468 - (30%)
Similarity:224/468 - (47%) Gaps:82/468 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PQHGRRDRPKYPPNKFIKTHPCERSSCYPATGNLLIGRENRLTASSTCGLHSPERFCIL---SHL 89
            |.:..:.||||               |.|...|:.:|:|  :..|:||| .:|::.|..   :::
 Frog    41 PCYDAKQRPKY---------------CIPDFINVALGQE--VITSNTCG-RTPQKLCYFLDSTNV 87

  Fly    90 QDKKCFLCD-TREETKHDPYKNHRIGQIIYKTKPGTNIPTWWQSENG---KENATIQLDLEAEFH 150
            ..::|.||| .|.|..:.|         .|.|  .|:..|.|:||:|   .:|.|:.|.|...|.
 Frog    88 TSRRCQLCDQKRPENSYPP---------SYMT--DTDAQTCWKSESGITFPQNVTLTLPLGRRFE 141

  Fly   151 FTHLIITFTTFRPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVPTVLENITDVM-----CTSR 210
            ..:..:.|.:.||.:|.|.:|.|:|:||..:::::..|:..:....|  ..|:..|     ||..
 Frog   142 LVYASLRFCSPRPDSMAIYKSMDYGKTWIPFQFYSTHCRRVYDQATT--SAISKPMQHEATCTDF 204

  Fly   211 YSNVEPSRNGEVIFRVLP--PNINVTDPYAEHVQNQLKMTNLRIQMTKLH---KLGDNLLDSRLE 270
            .:.|:|...|.|.|..|.  |:....: |:..:|:.:..|::|:...:||   |:|        .
 Frog   205 QTGVKPLTKGLVAFMPLAGRPSARRFE-YSPVLQDWVTATDIRVVFNRLHHGKKMG--------I 260

  Fly   271 NEEKYYYGISNMVVRGSCSCYGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDF 335
            ..:..:||:|.:.|.|.|.|.||||:|         ...::|::   |||.|||.|..|:.|:.|
 Frog   261 RRKTAFYGVSEIQVGGRCKCNGHASRC---------TAGKEGLM---CECQHNTIGPECDACKPF 313

  Fly   336 FNDLPWKPAFGKKTNACKKCECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPY 400
            :.|.||:.|.....:.|..||||.|:..|.|:..::..||..|||||.||.|||.|:||..|...
 Frog   314 YYDRPWQRATPSNAHECVACECNLHSHRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKQG 378

  Fly   401 FYRDPEQDITSERVCQPCDCDPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYW 465
            :.||..:.|||.:.|:||.|.|.|:. :.:|:.        ..|.|.||..|||..||:|..||.
 Frog   379 YKRDLSKPITSRKACKPCQCHPIGAV-NAMCNQ--------TTGQCQCKTGVTGPTCNRCAPGYQ 434

  Fly   466 NLQSDNPEGCEPC 478
            ..:|.:    .||
 Frog   435 QSRSAH----MPC 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653 66/248 (27%)
EGF_Lam 287..343 CDD:238012 21/55 (38%)
Laminin_EGF 355..415 CDD:395007 28/59 (47%)
Laminin_EGF 418..475 CDD:395007 18/56 (32%)
EGF_Lam 477..526 CDD:238012 2/2 (100%)
EGF_Lam 529..567 CDD:214543
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:395007
Laminin_EGF 883..930 CDD:395007
Laminin_EGF 933..988 CDD:395007
Laminin_EGF 991..1035 CDD:395007
Laminin_EGF 1043..1091 CDD:395007
Laminin_EGF 1094..1142 CDD:395007
Laminin_EGF 1142..1190 CDD:395007
Mplasa_alph_rch 1228..>1771 CDD:275316
cc_DmLAMB1-like_C 1717..1786 CDD:411973
ntn5NP_001072385.1 Laminin_N 48..276 CDD:470680 70/267 (26%)
EGF_Lam 277..321 CDD:238012 21/55 (38%)
Laminin_EGF 333..393 CDD:395007 28/59 (47%)
EGF_Lam 395..444 CDD:238012 21/62 (34%)
NTR_netrin-1_like 484..598 CDD:239634
Blue background indicates that the domain is not in the aligned region.

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