DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and ntng1a

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_009295804.2 Gene:ntng1a / 569075 ZFINID:ZDB-GENE-091118-13 Length:545 Species:Danio rerio


Alignment Length:586 Identity:157/586 - (26%)
Similarity:238/586 - (40%) Gaps:162/586 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 CERSSCYPAT-GNLLIGRENRLTASS----------------------------TCGLHSPERFC 84
            |:.:..|||| |:..:.:....|...                            ||| ..||.:|
Zfish    17 CQATQHYPATWGHYDLCKSQGYTEEGLTWYYMACQPEAADMTKYLKVTLDPPNITCG-DPPETYC 80

  Fly    85 ILSHLQDKKCFLCDTR-----EETKHDPYKNHRIGQIIYKTKPGTNIPTWWQSENGKE------- 137
            .|     :..::|:..     :|..|.|       ::::.. .|.|..|:|||.:.|:       
Zfish    81 TL-----ENPYMCNNECDAATDELAHPP-------ELMFDI-VGRNPTTFWQSTSWKKYPKPLAV 132

  Fly   138 ------NATIQLDLEAEFHFTHLIITFTTFRPAAMYIERSFDFGQTWHIYRYFAYDCKESFPGVP 196
                  |.||:|.       ..::|||.:.||..|.:|:|.|:|::|..|:::|.||.::|...|
Zfish   133 NITLSWNKTIELT-------DDIVITFESGRPEQMVLEKSLDYGRSWQPYQFYATDCLDAFTMEP 190

  Fly   197 TVLENIT-----DVMCTSRYSNVEPSRNGEVI-FRVL--------PPNINVTDPYAE-----HVQ 242
            ..:::||     |::||..||.....:|.:.: |.:.        |...|:...|.:     :::
Zfish   191 KTMKDITQHTLLDIICTEEYSRGYVWKNDKTVRFEIRDRFALFAGPKLHNMASLYGQLDTTKNLR 255

  Fly   243 NQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSCYGHASQCLPLDPAFSQA 307
            :...:|:|||::.: ...|..::|.  .|..:|||.||::.|.|.|.|..||:.|:        .
Zfish   256 DFFTITDLRIRLLR-PATGATMVDE--NNLSRYYYAISDIKVHGRCKCNLHANSCI--------Y 309

  Fly   308 DNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWK-----PAFGKKTNACK-------KCECNDH 360
            |.|    ...|||.|||.|.:|..|:..|....|.     |......|.|.       .|||.:|
Zfish   310 DKE----KLTCECEHNTTGPDCGRCKRNFQARAWSAGSYLPIPKGTANICMANYAGPVNCECYNH 370

  Fly   361 AVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGS 425
            :..|.:.|.       ::..:|.:|.||||||||..|...:||:.......|.:|..|:|:|.||
Zfish   371 SNRCSYIEV-------LNAVICVSCKHNTRGQHCHLCKLGYYRNATAKPDDENICIDCNCNPFGS 428

  Fly   426 SDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGY-WNLQSDNPEGCEPCTC-NPLGTLNN 488
            ..|. |:.         .|.|.||...||..|::|..|| |    ||  ||:...| :.|....|
Zfish   429 ESDR-CNG---------TGYCRCKEGATGAMCHECLPGYLW----DN--GCKSRVCDSELLRCQN 477

  Fly   489 SGCVMRTGECKCKKYVTGKDCN--QCMPETYGLSESPEGCSLCNCDAGGSYDNYCDVISGQCRCR 551
            .|..:....|:|....||..|.  :|..|       |.||       |||       .|||....
Zfish   478 GGVCVNYVRCQCPPAYTGLLCEKPRCEKE-------PGGC-------GGS-------DSGQASLH 521

  Fly   552 P 552
            |
Zfish   522 P 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653 70/297 (24%)
EGF_Lam 287..343 CDD:238012 18/60 (30%)
Laminin_EGF 355..415 CDD:395007 20/59 (34%)
Laminin_EGF 418..475 CDD:395007 20/57 (35%)
EGF_Lam 477..526 CDD:238012 12/51 (24%)
EGF_Lam 529..567 CDD:214543 7/24 (29%)
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:395007
Laminin_EGF 883..930 CDD:395007
Laminin_EGF 933..988 CDD:395007
Laminin_EGF 991..1035 CDD:395007
Laminin_EGF 1043..1091 CDD:395007
Laminin_EGF 1094..1142 CDD:395007
Laminin_EGF 1142..1190 CDD:395007
Mplasa_alph_rch 1228..>1771 CDD:275316
cc_DmLAMB1-like_C 1717..1786 CDD:411973
ntng1aXP_009295804.2 Laminin_N 50..296 CDD:459653 64/269 (24%)
EGF_Lam 297..343 CDD:238012 18/57 (32%)
EGF_Lam 355..413 CDD:238012 20/64 (31%)
EGF_Lam 421..468 CDD:238012 22/62 (35%)
EGF_CA <475..499 CDD:238011 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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