DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and NTN3

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:NP_006172.1 Gene:NTN3 / 4917 HGNCID:8030 Length:580 Species:Homo sapiens


Alignment Length:493 Identity:143/493 - (29%)
Similarity:221/493 - (44%) Gaps:86/493 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 PCERS-----SCYPATGNLLIGRENRLTASSTCGLHSPERFCILSHLQDKKCFLCDTREETKHDP 107
            ||...     .|.|...|..:|||  :.||||||..:..              .||.     .||
Human    29 PCHDEGGAPRGCVPGLVNAALGRE--VLASSTCGRPATR--------------ACDA-----SDP 72

  Fly   108 YKNHRIGQIIYKTKP-GTNIPTWWQSEN---GKENATIQLDLEAEFHFTHLIITFTTFRPAAMYI 168
            .:.|....:   |.| ||..|..|:||:   ...|.|:.:.|...|....:.:.|.:..||::.:
Human    73 RRAHSPALL---TSPGGTASPLCWRSESLPRAPLNVTLTVPLGKAFELVFVSLRFCSAPPASVAL 134

  Fly   169 ERSFDFGQTWHIYRYFAYDCKESFPGVPTVLENIT----DVMCTSRYSNVEPSRNGEVIFRV--- 226
            .:|.|.|::|....:|:..|...:..:|.......    :.:|... ...:|..:|.:.|.:   
Human   135 LKSQDHGRSWAPLGFFSSHCDLDYGRLPAPANGPAGPGPEALCFPA-PLAQPDGSGLLAFSMQDS 198

  Fly   227 LPPNINV-TDPYAEHVQNQLKMTNLRIQMTKLHKLGDNLLDSRLENEEKYYYGISNMVVRGSCSC 290
            .||.::: :.|.   :|:.:..|::|:.:|:....||   ...:|....|.|..:::.|.|.|.|
Human   199 SPPGLDLDSSPV---LQDWVTATDVRVVLTRPSTAGD---PRDMEAVVPYSYAATDLQVGGRCKC 257

  Fly   291 YGHASQCLPLDPAFSQADNEDGMVHGRCECTHNTKGMNCEECEDFFNDLPWKPAFGKKTNACKKC 355
            .||||:||        .|.:..::   |:|.|.|:|.:|..|:.|:.|.||:.|..::::||..|
Human   258 NGHASRCL--------LDTQGHLI---CDCRHGTEGPDCGRCKPFYCDRPWQRATARESHACLAC 311

  Fly   356 ECNDHAVSCHFDEAVFTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDC 420
            .||.||..|.|:..::..||..|||||.||.|||.|:||..|...|||||.:.::..|.|:.|||
Human   312 SCNGHARRCRFNMELYRLSGRRSGGVCLNCRHNTAGRHCHYCREGFYRDPGRALSDRRACRACDC 376

  Fly   421 DPQGSSDDGICDSLNELEEGAVAGACHCKAFVTGRRCNQCKDGYWNLQSDNPEGCEPCTCNPLGT 485
            .|.|::.. .|:.        ..|.|.||..|||..||:|..|:  .||.:|  ..||...|:  
Human   377 HPVGAAGK-TCNQ--------TTGQCPCKDGVTGLTCNRCAPGF--QQSRSP--VAPCVKTPI-- 426

  Fly   486 LNNSGCVMRTGECKCKKYVTGKDC-NQCMPE--TYGLS 520
                     .|..:....|..:|| :.|.|.  :|.:|
Human   427 ---------PGPTEDSSPVQPQDCDSHCKPARGSYRIS 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653 56/243 (23%)
EGF_Lam 287..343 CDD:238012 20/55 (36%)
Laminin_EGF 355..415 CDD:395007 29/59 (49%)
Laminin_EGF 418..475 CDD:395007 20/56 (36%)
EGF_Lam 477..526 CDD:238012 11/47 (23%)
EGF_Lam 529..567 CDD:214543
EGF_Lam 789..834 CDD:214543
Laminin_EGF 837..885 CDD:395007
Laminin_EGF 883..930 CDD:395007
Laminin_EGF 933..988 CDD:395007
Laminin_EGF 991..1035 CDD:395007
Laminin_EGF 1043..1091 CDD:395007
Laminin_EGF 1094..1142 CDD:395007
Laminin_EGF 1142..1190 CDD:395007
Mplasa_alph_rch 1228..>1771 CDD:275316
cc_DmLAMB1-like_C 1717..1786 CDD:411973
NTN3NP_006172.1 LamNT 34..253 CDD:214532 56/249 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..83 5/42 (12%)
EGF_Lam 254..299 CDD:238012 20/55 (36%)
Laminin_EGF 311..362 CDD:395007 27/50 (54%)
EGF_Lam 373..422 CDD:238012 21/61 (34%)
NTR_like 456..562 CDD:470599 143/493 (29%)
Cell attachment site, atypical. /evidence=ECO:0000255 500..502
Blue background indicates that the domain is not in the aligned region.

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