DRSC/TRiP Functional Genomics Resources

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Protein Alignment LanB1 and Agrn

DIOPT Version :10

Sequence 1:NP_476618.1 Gene:LanB1 / 34068 FlyBaseID:FBgn0261800 Length:1788 Species:Drosophila melanogaster
Sequence 2:XP_006538554.1 Gene:Agrn / 11603 MGIID:87961 Length:2057 Species:Mus musculus


Alignment Length:1239 Identity:255/1239 - (20%)
Similarity:384/1239 - (30%) Gaps:446/1239 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   371 FTASGFVSGGVCDNCLHNTRGQHCEECMPYFYRDPEQDITSERVCQPCDCDPQGSS---DDGICD 432
            |||:..:...||       ||..|               ....||:|...||..:|   ...:|.
Mouse   163 FTAAPSMPPDVC-------RGMLC---------------GFGAVCEPSVEDPGRASCVCKKNVCP 205

  Fly   433 SLNELEEGAVAGACHCKAFVTGRRCN----QC-KDGYWNLQSDNPEGC-EPC---TCNPLGTLNN 488
            ::       ||..|...|......|.    || :.....|....|.|. :||   ||:     ..
Mouse   206 AM-------VAPVCGSDASTYSNECELQRAQCNQQRRIRLLRQGPCGSRDPCANVTCS-----FG 258

  Fly   489 SGCVM----RTGECKCKKYVTGKDCNQCMPET-YGLSESPEGCSLCNCDAGGSYDNYCDVISGQC 548
            |.||.    :|..|.|             |.| :|   :|:| ::|..| |..|.:.|.::...|
Mouse   259 STCVPSADGQTASCLC-------------PTTCFG---APDG-TVCGSD-GVDYPSECQLLRHAC 305

  Fly   549 RCRPHMTGR------SC--SQPKQNYFIPLLPEVHEAEVVDECISYGANGNCSLVAETPDGSFTG 605
            ..:.|:..:      .|  |....|:...:.|.....|::..                       
Mouse   306 ANQEHIFKKFDGPCDPCQGSMSDLNHICRVNPRTRHPEMLLR----------------------- 347

  Fly   606 IGFTRVPENSELVFT--VGDIPRSMPYDAVIRYQSTSRGDWENAFITLVRPDQVDPEGGCGELAA 668
                  |||.....|  .||...:...|.|:.....:||    ..:..||..|......|.|...
Mouse   348 ------PENCPAQHTPICGDDGVTYENDCVMSRIGAARG----LLLQKVRSGQCQTRDQCPETCQ 402

  Fly   669 ATS---SETRIPFSLPDRSRQVVALNEVCLEAGKVYK---FRIYFERKRHDVDSPTATILVDSLT 727
            ..|   |....|....||.....|...||.:.|..|.   :|...|.::...             
Mouse   403 FNSVCLSRRGRPHCSCDRVTCDGAYRPVCAQDGHTYDNDCWRQQAECRQQQT------------- 454

  Fly   728 LIPRIDVTPIFQGSVLADIRKKDYEKYNCKSSLYDMNYKSDPKCQNLDNILSVF-----VHDGAS 787
                  :.|..||..       |.....|:.:          :|        .|     |.:|.:
Mouse   455 ------IPPKHQGPC-------DQTPSPCRGA----------QC--------AFGATCTVKNGKA 488

  Fly   788 MCNCNP--TGSLSKVCESN----GGYCQCKPN--VVGRQ--------CDQCAPGTYGFGPEGCKA 836
            :|.|..  :|....||.|:    |..|:.:..  .:||:        ||:|....:|        
Mouse   489 VCECQRVCSGGYDPVCGSDGVTYGSVCELESMACTLGREIRVARRGPCDRCGQCRFG-------- 545

  Fly   837 CDCNSIGSKDKYCDLITGQCQCVPNTYGREC-NQCQPGYWNFPECRVCQCNGH--AATCDPIQGT 898
                      ..|::.||:|.| |:    || ...||         ||..:||  |:.|:.....
Mouse   546 ----------SLCEVETGRCVC-PS----ECVESAQP---------VCGSDGHTYASECELHVHA 586

  Fly   899 C---IDCQDSTTGYSCDSCLDGYYGNPL--FGSEIGCRPCRCPETV---------ASGLAHADGC 949
            |   |....::.|: |.:|     |..:  ||:......|.||...         :.|:.:...|
Mouse   587 CTHQISLYVASAGH-CQTC-----GETVCTFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYLSAC 645

  Fly   950 SLDTRNNNMLCHCQEGYSGSRCEICADNFFGNPDNGGTCSKCECSNNVDLYDTGNCDRQTGACLK 1014
            .|    ....|..|.....:|              .|.|...||.:.      |:...:..||.:
Mouse   646 EL----REAACQQQVQIEEAR--------------AGPCEPAECGSG------GSGSGEDNACEQ 686

  Fly  1015 CLYQTTGDHCELCKDGFFGDALQQNCQQ--CECDF----------LGTNNTI---------AHCD 1058
                      |||:.  .|....::.:.  |.|||          .|::...         |.|:
Mouse   687 ----------ELCRQ--HGGVWDEDSEDGPCVCDFSCQSVLKSPVCGSDGVTYSTECHLKKARCE 739

  Fly  1059 -------RFTGQC------PCLPNVQGVRCDQ----CAENHWKIASG---EGCES-CNCDPIGAL 1102
                   ...|.|      |.|| :....|.|    |.:::...|.|   .||.| |:|:|.|:.
Mouse   740 ARQELYVAAQGACRGPTLAPLLP-MASPHCAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSY 803

  Fly  1103 HEQCNSYTGQCQCKPGFGGRACNQCQAHYWG------NPNEKCQPCECDQFGAADFQCDRETGNC 1161
            ...|:..||||.|:||.||..|::|:..:|.      :.:..|.||.||..||....|::.||.|
Mouse   804 SGTCDPVTGQCSCRPGVGGLRCDRCEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLC 868

  Fly  1162 VCHEGIGGYKCNEC----ARGYIG-----QFP------HCSPCGECFNNWDLILSALEDA----- 1206
            .|..|:.|.||.:|    |.|::|     ..|      ||.....|          :|:|     
Mouse   869 SCRPGVAGPKCGQCPDGQALGHLGCEADPTTPVTCVEMHCEFGASC----------VEEAGFAQC 923

  Fly  1207 --TTATILRAKEIKQVGATG-AYTSEF--------SELDKKLQHI-------------------- 1240
              .|.|...|...|..|:.| .|.:|.        ..||..:|.:                    
Mouse   924 VCPTLTCPEANSTKVCGSDGVTYGNECQLKTIACRQRLDISIQSLGPCRESVAPGVSPTSASMTT 988

  Fly  1241 -RNLLQNTSVSLVDIEKLDYETQS------LRDQLQASHGRLSETEQNLDDIYNSLS-------- 1290
             |::|..|..|......|...|.:      |....|...|....|.....|:.:..:        
Mouse   989 PRHILSRTLASPHSSLPLSPSTTAHDWPTPLPTSPQTVVGTPRSTAATPSDVASLATAIFRESGS 1053

  Fly  1291 --------LSGVELES--------------LQNHSRLVQQLS---------KELKENGIQLQESN 1324
                    |||.|..|              :..|...:::.|         .:.|...:..:.||
Mouse  1054 TNGSGDEELSGDEEASGGGSGGLEPPVGSVVVTHGPPIERASCYNSPLGCCSDGKTPSLDSEGSN 1118

  Fly  1325 ------IEGALNLTRHAYERVSNLSTLKDEANELASNTDRNCKRVENLSNKIQAEADDLANNNKL 1383
                  .:|.|.|.....:.:.....:.|..:||...|.|:          |::..|||..|:.:
Mouse  1119 CPATKAFQGVLELEGVEGQELFYTPEMADPKSELFGETARS----------IESTLDDLFRNSDV 1173

  Fly  1384 IEDY 1387
            .:|:
Mouse  1174 KKDF 1177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LanB1NP_476618.1 Laminin_N 54..286 CDD:459653
EGF_Lam 287..343 CDD:238012
Laminin_EGF 355..415 CDD:395007 8/43 (19%)
Laminin_EGF 418..475 CDD:395007 13/64 (20%)
EGF_Lam 477..526 CDD:238012 14/56 (25%)
EGF_Lam 529..567 CDD:214543 10/45 (22%)
EGF_Lam 789..834 CDD:214543 14/60 (23%)
Laminin_EGF 837..885 CDD:395007 12/48 (25%)
Laminin_EGF 883..930 CDD:395007 13/53 (25%)
Laminin_EGF 933..988 CDD:395007 10/63 (16%)
Laminin_EGF 991..1035 CDD:395007 9/43 (21%)
Laminin_EGF 1043..1091 CDD:395007 17/86 (20%)
Laminin_EGF 1094..1142 CDD:395007 18/53 (34%)
Laminin_EGF 1142..1190 CDD:395007 21/62 (34%)
Mplasa_alph_rch 1228..>1771 CDD:275316 39/240 (16%)
cc_DmLAMB1-like_C 1717..1786 CDD:411973
AgrnXP_006538554.1 NtA 33..148 CDD:460825
KAZAL 198..244 CDD:197624 9/52 (17%)
KAZAL 274..319 CDD:197624 13/62 (21%)
Kazal_1 351..391 CDD:395004 9/43 (21%)
KAZAL_FS 423..463 CDD:238052 10/58 (17%)
KAZAL 491..536 CDD:197624 9/44 (20%)
KAZAL 556..601 CDD:197624 15/59 (25%)
KAZAL 621..666 CDD:197624 9/62 (15%)
KAZAL 706..752 CDD:197624 7/45 (16%)
Laminin_EGF 795..837 CDD:395007 17/41 (41%)
Laminin_EGF 849..>885 CDD:395007 15/35 (43%)
KAZAL 924..971 CDD:197624 11/46 (24%)
SEA 1121..1245 CDD:214554 14/67 (21%)
EGF 1322..1352 CDD:394967
Laminin_G_1 1389..1520 CDD:395008
Laminin_G_1 1657..1792 CDD:395008
EGF_CA 1814..1846 CDD:238011
Laminin_G_1 1910..2040 CDD:395008
Blue background indicates that the domain is not in the aligned region.

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