DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and ninaD

DIOPT Version :10

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_724087.1 Gene:ninaD / 326160 FlyBaseID:FBgn0002939 Length:513 Species:Drosophila melanogaster


Alignment Length:469 Identity:138/469 - (29%)
Similarity:232/469 - (49%) Gaps:30/469 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 IGIFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENWKSPPIDLSLDIYLYNWTNPEDF 83
            :|.|....||..|:|   |....|..:.|.:.|.|.::.:|.|:..||.:.:.:||:||||..|.
  Fly    18 LGTFFAVSGLLAIIC---WPGFIDSGIMKALPLTPTSKTFEKWEELPIPVYVYMYLWNWTNAADV 79

  Fly    84 GNLSTKPILEQVGPYRFIERPDKVDIHWHPENASVTYRRRSLFYFDAAGSNGSLDDEITTLNAVA 148
            .....|||..|:|||.:.|...|:|:.|| :|.:||:..|..::::...|.|...|.||..:..:
  Fly    80 QANGVKPIFAQLGPYVYREERKKMDLEWH-DNGTVTFNPRRTWFWEEELSGGKQTDLITAPHLPS 143

  Fly   149 LSAAATAKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMIDVAMAM--PIFGDEVKV 211
            |:|:...:......:.:.:..|...|..:.|..:..|.||..:.|..:..||.:  |:.   .|:
  Fly   144 LAASNQMRNSNVFLKFMFNEALNANGGHLFVTHTAAEWLFESFYDEFLHYAMTLNNPLV---PKI 205

  Fly   212 PFDKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFFDSYCGMTNGSAGE-FQP 275
            ..|.|.||..||||.|..|.|.|.||...:.::|::..|..|.:||::|..||..|||..: |.|
  Fly   206 ESDHFAWFLNRNGSKDFEGPFTVHTGVGDIKEMGEIKYWKGQNHTGWYDGECGRLNGSTTDLFVP 270

  Fly   276 QHLKPGDSVGLFTPDMCRTIPLDYV-ETVDIEGLEGYKFSGGPRSVDNGTQYPENLCFC-----G 334
            ...|. .::.:|.||.||.|.|::. ::..|:|:.|:|:...|.:.|||.......|:|     .
  Fly   271 DEPKE-KALTIFIPDTCRIINLEFTGQSETIQGITGWKYEITPNTFDNGQINGNAKCWCPLERQP 334

  Fly   335 GQCVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYMVVQPSTGIPLEVA 399
            ..|..:|..::..|..|.|:::|..||..||..|...:.|.:||...:.||::::...|:||:|.
  Fly   335 DNCPATGATDLGPCADGVPMYLSADHFMYADESYGSTISGYNPNYDQNNFYIIMERKMGVPLKVN 399

  Fly   400 ARFQVNMLVEPIQGISLYTGIPRIFFPLVWFEQKVRITPDMADQLKV---LPIVMLSGHIFAGI- 460
            |...:.:.:||...|.:..|:|..:.||.....:..|...:|.:|::   ||.:   |. :.|: 
  Fly   400 ANVMITLYIEPDSVIDILKGLPSFYAPLFTTASRAEIDEALASELRLALNLPAI---GR-YTGVG 460

  Fly   461 -----CLIVGITLL 469
                 |:::.:.:|
  Fly   461 FLCLGCILIAVGIL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 21..476 CDD:460076 137/467 (29%)
ninaDNP_724087.1 CD36 17..476 CDD:460076 138/469 (29%)

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