DRSC/TRiP Functional Genomics Resources

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Protein Alignment santa-maria and scav-3

DIOPT Version :10

Sequence 1:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster
Sequence 2:NP_499625.2 Gene:scav-3 / 176673 WormBaseID:WBGene00013039 Length:534 Species:Caenorhabditis elegans


Alignment Length:456 Identity:120/456 - (26%)
Similarity:217/456 - (47%) Gaps:53/456 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ENWKSPPIDLSLDIYLYNWTNPEDFGNLSTKPILEQVGPYRFIERPDKVDIHWHPENASVTYRRR 123
            ::|..|...:.|:|:::|.||.:.......||.|.::||:.|.|..:||...:...:..|.|:.:
 Worm    63 KSWLKPLYAMQLNIWMFNVTNVDGILKRHEKPNLHEIGPFVFDEVQEKVYHRFADNDTRVFYKNQ 127

  Fly   124 SLFYFDAAGSNGS-----LDDEITTLNAV---ALSAAATAKYWPPVKRSLVDVGLKMYGAEMSVQ 180
            .|::|:   .|.|     ||.::|..|.|   .:.||....:...:|.::..| |||......:.
 Worm   128 KLYHFN---KNASCPTCHLDMKVTIPNIVFQKLIDAADVTIFGVRIKFAIESV-LKMVSEAPYIT 188

  Fly   181 KSIDELLFTGYNDAMIDVAMAMPI--FGDEVKVPFDKFGWFYTRNGSADLTGVFNVFTGADQLAK 243
            ..:.:.||.||.|.:||:.....|  |..|......:.|:||.:||:.|  |::.|..|....:|
 Worm   189 VKVSDALFDGYEDPIIDIVCKNKILQFLCETNSLQRRVGFFYGQNGTTD--GIYEVDAGVPSPSK 251

  Fly   244 LGQMHSWNYQEN--TGFFDS-YCGMTNGSAGEFQPQHLKPGDSVGLFTPDMCRTIPLDYVETVDI 305
            :|.:::||....  .|.:|: |..|.||:.|:.....||..|.:.:|.|.:||:|.::|.:.|.:
 Worm   252 IGHLYTWNNMTEMPEGTWDTKYARMINGTDGQLFSPMLKREDRLTIFVPQICRSIQMEYTKDVAV 316

  Fly   306 EGLEGYKF--------------------SGGPRSVDNGTQYPENLCFCGGQCVPSGVMNISSCRF 350
            .|:..:::                    :|.||..||.|...||       |:|:|::::|.|:.
 Worm   317 NGVPSWRYAPPLDLYDPALPQNRAFCNKNGMPRYFDNTTVQIEN-------CLPAGLIDLSRCQA 374

  Fly   351 GSP-VFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYMV-VQPSTGIPLEVAARFQVNMLVEPIQG 413
            |:| |::|.|||:|:.......|.|||.....::..:| ::|:.|:|.:.....|:|  |..::|
 Worm   375 GNPRVYLSNPHFYNSPMELWHSVTGLSVPTASNDLTVVDIEPTAGVPTQAKRIMQIN--VGMVKG 437

  Fly   414 -ISLYTGIPRIFFPLVWFEQKVRITPDMADQLKVLPIVMLSGHIFAGICLIVGITLLCWTPVQIL 477
             :|:......:..|::|..:.........|||  :.|.....:.|.|..:.:.:.|:.|..|.::
 Worm   438 SLSVTENTTNVVVPVLWMNETAYFDQGTRDQL--INIFNAKHYSFIGGVISLSLGLIAWLAVFVV 500

  Fly   478 L 478
            :
 Worm   501 I 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
santa-mariaNP_609121.2 CD36 21..476 CDD:460076 120/452 (27%)
scav-3NP_499625.2 CD36 52..501 CDD:460076 120/454 (26%)
CcoQ <488..522 CDD:443770 3/14 (21%)

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