DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt6 and cwn-1

DIOPT Version :10

Sequence 1:NP_609108.3 Gene:Wnt6 / 34010 FlyBaseID:FBgn0031902 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_493668.1 Gene:cwn-1 / 173399 WormBaseID:WBGene00000857 Length:372 Species:Caenorhabditis elegans


Alignment Length:419 Identity:127/419 - (30%)
Similarity:188/419 - (44%) Gaps:113/419 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PNLMCKKTRRLRGKLAEICRHDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMRKI--- 92
            |...||..:.|..:....|:.:..|: |.:.:|......||:|||..||||||::.....::   
 Worm    38 PGTSCKSLKGLTRRQMRFCKKNIDLM-ESVRSGSLAAHAECQFQFHKRRWNCTLIDPVTHEVIPD 101

  Fly    93 --LMRDSRETGFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAEAALER 155
              |..::||:.||:||::|.|.|.||:.|..|....|.||.:   :|                  
 Worm   102 VFLYENTRESAFVHAISSAAVAYKVTRDCARGISERCGCDYS---KN------------------ 145

  Fly   156 QQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNRRPGGRRGRRKFWDNIKFPEG 220
                                                 :|.|                      :.
 Worm   146 -------------------------------------DHSG----------------------KS 151

  Fly   221 QWEWGGCSDNVNFGLRHSRVFLDAKQRQ---RRSDLGT--------------LVKFHNNNAGRLA 268
            |:::.||||||.||:..|:.|:|:.||:   .:.|.||              ::..|||.|||..
 Worm   152 QFQYQGCSDNVKFGIGVSKEFVDSAQRRVLMMKDDNGTSLLGPSQLSADGMHMINLHNNQAGRQV 216

  Fly   269 IRDAMRLECKCHGLSGSCTVKTCWLKMPPFREVAGRLRDRYDSARKV-TLRNDG----NSFMPES 328
            :..::|.||||||:||||.::|||..:|.||.:...::|::|.|.:| .::.||    ...|..|
 Worm   217 LEKSLRRECKCHGMSGSCEMRTCWDSLPNFRHIGMAIKDKFDGAAEVKVVKEDGIEKPRIVMKNS 281

  Fly   329 PHARPANKYQLVFADDSPDFCTPNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRR--IVEE 391
            ...|..|. .||:...|||||..:...|.|||:||:|.:..:..|.|..|||.||:.::  ||||
 Worm   282 QFKRHTNA-DLVYMTPSPDFCESDPLRGILGTKGRQCTLAPNAIDDCSLLCCGRGYEKKVQIVEE 345

  Fly   392 QTNCKCVFKWCCEVTCEKCLEHRAVNTCL 420
            :.|||  |.:||||.||.|.:......||
 Worm   346 KCNCK--FIYCCEVRCEPCQKRIEKYLCL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt6NP_609108.3 Wnt_Wnt6 29..420 CDD:381712 125/417 (30%)
cwn-1NP_493668.1 Wnt_Wnt4 42..372 CDD:381710 124/413 (30%)

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