DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt4 and LOC100487954

DIOPT Version :10

Sequence 1:NP_476972.2 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster
Sequence 2:XP_002938545.1 Gene:LOC100487954 / 100487954 XenbaseID:XB-GENE-29078991 Length:354 Species:Xenopus tropicalis


Alignment Length:324 Identity:109/324 - (33%)
Similarity:157/324 - (48%) Gaps:37/324 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   240 CRYMPA-TRRQNHQCRKETGLPGTLSEARRLATTHCEEQFRYDRWNC-----SIETRGKRNIFKK 298
            |..:|. ..:|...||....:..:::|..:|....|:.|||..||||     |:...|.  :..|
 Frog    44 CGSIPGLVPKQMRFCRNYIEIMPSVAEGIKLGIQECQHQFRGRRWNCTTIHDSLAIFGP--VLDK 106

  Fly   299 LYKETAFVHALTAAAMTHSIARACAEGRMTKCSCGPKKHNREAQDFQWGGCNDNLKHGKRVTRSF 363
            ..:|:|||||:.:|.:..::..:||||..|.|.|...........::||||:::...|..|:|.|
 Frog   107 ATRESAFVHAIASAGVAFAVTHSCAEGSSTICGCDSHHKGSPGDGWKWGGCSEDADFGVLVSREF 171

  Fly   364 LDLRGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNATATLLRQK 428
            .|.:....|..|.|.||::|.|...:...|..:|||||:||||.:||||....||.|....|:.|
 Frog   172 ADAQENRPDARSAINRHNNEAGRATILDHMHLRCKCHGLSGSCEVKTCWWSQPDFRAIGDHLKDK 236

  Fly   429 YNEAIRKA--PNQRSMRQVSSSRMK----KPKQRRKKPQQSQYTTLYYLETSPSYCAV------- 480
            |:.|...:  .::.|...|.:.|.|    ||...|         .|.|.||||::|..       
 Frog   237 YDSASEMSVEKHRESRGWVETLRAKYSLFKPPTER---------DLVYYETSPNFCEPNPETGSF 292

  Fly   481 -TKDRQC---LHP-DNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFCK 539
             |:.|.|   .|. |.|..||||||:.|:..|:.|||.|.|:  .||.:.|..|.|:.:.:.||
 Frog   293 GTQGRSCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFH--WCCYVSCQECVRIYDVHTCK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt4NP_476972.2 Wnt_Wnt9 245..539 CDD:381715 105/317 (33%)
LOC100487954XP_002938545.1 Wnt_Wnt3_Wnt3a 41..354 CDD:381709 107/322 (33%)

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