DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mEFG1 and F58G1.8

DIOPT Version :10

Sequence 1:NP_609105.1 Gene:mEFG1 / 34004 FlyBaseID:FBgn0263133 Length:745 Species:Drosophila melanogaster
Sequence 2:NP_496753.1 Gene:F58G1.8 / 186541 WormBaseID:WBGene00010270 Length:83 Species:Caenorhabditis elegans


Alignment Length:58 Identity:28/58 - (48%)
Similarity:39/58 - (67%) Gaps:0/58 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   417 VDCASGDTFTTNPKNNLSMESIFVPEPVVSMAIKPNNTKDRDNFSKAIARFTKEDPTF 474
            :|..:.:||:|:.......|.|.:|||.:|:|:|..|.||.|||.||:.|||||:|||
 Worm    18 LDLTARETFSTDQNLAPHCEPIHIPEPAISVALKSVNRKDADNFIKALTRFTKEEPTF 75

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFG1NP_609105.1 FusA 38..731 CDD:440248 28/58 (48%)
F58G1.8NP_496753.1 PRK12740 <28..>77 CDD:237186 25/48 (52%)

Return to query results.
Submit another query.