Protein Alignment Caper and tiar-1

DIOPT Version :10

• Sequence 1: NP_609095.1
• Gene: Caper / 33989
• FlyBaseID: FBgn0031883
• Length: 594
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 225
• Identity: 60/225 - (26%)
• Similarity: 97/225 - (43%)
• Gaps: 39/225 - (17%)

  Fly   194 RSHSRSRDRNSRRRGTNSPRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFS 258
            |.||:..:|.....|          ||:|            :.||::...|...|....:...|:
 Worm    25 RMHSKLAEREGFHLG----------NGSD------------EPRTLYVGNLDSTVTEDFIATLFN 67

  Fly   259 SVGKVRDVRLITCNKTKRFKG----IAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRL 319
            .:|.|...::|       |.|    .|::||.|....:.||....:|||....|..:...|..:.
 Worm    68 QIGSVTKTKVI-------FDGSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKVNWAVEPGQQ 125

  Fly   320 QNAAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYH 384
            |:....      |....::||.|...:....||..|:|||.:...::|.||.|.:||||||::|.
 Worm   126 QSKIDT------TRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYP 184

  Fly   385 NADDAKKALEQLNGFELAGRLMKVGNVTER 414
            ..::|::|:||:||..|..|.::....|.:
 Worm   185 KREEAERAIEQMNGQWLGRRTIRTNWATRK 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Caper	NP_609095.1	SF-CC1	213..578	CDD:273721	55/206 (27%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	51/181 (28%)
		RRM2_TIA1_like	136..210	CDD:409789	28/73 (38%)